Andrographis paniculata: 127253167
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Entry
127253167 CDS
T08689
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127253167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127253167
03019 Messenger RNA biogenesis [BR:
apan03019
]
127253167
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127253167
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127253167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH_2
zf-CCCH
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
127253167
NCBI-ProteinID:
XP_051133567
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDDEGGLSFDFEGGLDTVPAHPTASVPVIQSSVPAAAAASTAANSANPSAAAPLQQPSQP
SDGMGAGGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCV
YKHTIEDIKECHMYKMGFCPNGPDCRYRHAKMPGPPPPVEEVFKKIQQMASFNSGNSNKF
HQNRNNNHSQHTEKSQFSQGPNGTNQVGKTNTIEPVNNLKQPLQVQQSQQQGSNGQVQNL
PDGQQNQANRTATPLPQGTSRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESME
NVILIFSVNKTRHFQGCAKMMSRIGGYVGGGNWKHAPGTAHYGRNFAVKWLKLCELSFDK
TRHLRNPFNENLPVKISRDCQELEASVGEQLASLLYLEPDSDLMAVSLAAELKREEEKAK
GVNNENGTENPDIVPFEDNEEEEEEESEEEEEELGQGFEAQGRGRGRGMMWPPHMPLAHG
ARPFPGRFPPNMMGGDGFSYGPVNPDGFPMPGPFGMPPRGFGPYGPRFSGDFAGPAPGMM
FPGRPSGFGMMMGPGRPPMGVSGGGAAAAAVRGGRPVGMPPPFYQQPPPPPAQKVKRDNE
APYGDRNDSSNQGKGQDVGGMDGDGGLNQQQRRRAPPPPPPQQEDHYNSGGGNGYRNEES
ESDDEDEAPRRSRHGEGKKKRRSLEAAESTAISGTQML
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaagggggtttgagcttcgatttcgaagggggtttggacaccgttcccgca
catccaactgcttccgtaccggttatccaatcctctgtgcccgccgccgccgccgcctct
actgcggctaattctgctaacccttccgccgccgcacccttgcagcaaccctcccagcca
tccgatgggatgggcgctggcggcagacggagcttccgccagacggtttgccgccactgg
ttgagatctctctgcatgaaaggtgatgcctgtggatttcttcatcagtatgacaagtct
cggatgccgatttgccggttttttcgcctgtacggcgagtgccgagagcaagattgcgtg
tacaaacacaccattgaggatatcaaggagtgccacatgtacaaaatgggattttgtcca
aatggtcctgactgtaggtataggcatgctaagatgcctggacctccacctcctgtggaa
gaagtttttaagaagattcagcaaatggcttcattcaactctggaaattcaaacaaattt
catcaaaatcgtaataacaatcactcccagcatacagaaaaatctcagttttcccaggga
cccaatggcacaaatcaagtagggaaaacaaacacaatcgagcctgttaacaatctgaag
caaccactgcaagtacagcaatctcagcaacagggcagcaatggacaagtacaaaatctt
cctgatggtcagcaaaatcaagctaataggaccgctacccccctgccccaaggaacatct
aggtacttcgttgttaaaagctgcaatcgtgaaaatcttgaactgtcagtgcagcaagga
gtatgggcaacacagcgaagcaatgaggccaaacttaatgaagcttttgaatctatggag
aatgtcattctgatcttctcagttaacaagactagacattttcagggttgtgcaaaaatg
atgtccagaattggtggctatgttggtggaggaaactggaaacatgctcctgggactgcc
cattatggtcgaaattttgcggtcaaatggttaaagctctgtgaattgtccttcgacaaa
actcgtcatttgaggaatccattcaatgagaacttaccagtgaagataagcagagattgt
caagaactagaggcgtcagttggtgagcagttggcatcgttgctctaccttgagcctgac
agcgatcttatggctgtgtcgcttgcagcggaattgaaacgggaagaggagaaggcaaag
ggagtaaacaatgagaatggaactgaaaatccggatattgtaccttttgaagacaacgaa
gaagaggaggaagaagagagtgaagaagaggaggaagagcttggacagggctttgaggct
caaggcagaggcaggggcagaggaatgatgtggcctcctcacatgcctcttgcacatggt
gctcggccatttcctgggcgtttcccccctaacatgatgggtggtgatggattttcatat
gggcctgtaaaccctgatggctttccaatgcctggcccttttggcatgcccccccgtggc
tttggtccatatggtccaagattctccggtgactttgcaggtcctgcccctggcatgatg
ttccctggtcgaccatctgggtttggaatgatgatgggcccaggaaggcctccaatgggt
gtgagtggaggtggtgctgctgctgctgcagtaagaggtggccggccagttggtatgccg
cctcccttttatcaacagcccccaccaccgccagcccagaaagtcaagagagataatgaa
gcaccatatggtgacaggaatgatagttcaaatcaaggcaagggacaagatgttggtgga
atggatggtgatgggggcctgaatcaacagcagagaaggagagctcctccccctcctcct
ccacaacaagaggatcattataacagtggtggtgggaatggttacaggaatgaagaaagc
gagagcgatgatgaggatgaagcaccaagaaggtcgaggcatggtgaagggaagaaaaag
aggcggagcttagaggcagcagaatcaaccgccatctctggcacccagatgttgtag
DBGET
integrated database retrieval system
