Andrographis paniculata: 127253183
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Entry
127253183 CDS
T08689
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127253183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127253183
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127253183
mRNA degradation factors
5'-3' decay
Decapping complex
127253183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
127253183
NCBI-ProteinID:
XP_051133588
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MDGYGGGGGGGGGSIGDSSKIQDLTPFGSKILDSGEDEFDASRYEFFGGEVMEEVELGGL
EDEEDDIVAFGLGEEGFLLDKGEDDALGPLSDIDDLSSTFLKLNTDVNLPTSTGGGRDWR
LRESSSAAEFPPGLDYPNWFDKHGYDAESFQESQKWPSAHSPSAHFMEPKSLSRASSYPE
QLQRPPQQSLHHQHSFEPILNPKLPFTTYPPPGGRLQQGLPNDQPGHPNIPYHPPVVSSG
LSTFPNPQLKLNPVPHGSQFGGNFPQLPHGRPPVNSQLQNQFAAQSGLHPGNHSGLPNNF
PPQKFPHQNGLMPAQLRPLHSQQPRMKLPYHGSFGHLPGPHSQLLNSQLSQSPPMLNNFD
MLGLPDLRDQRAMQHQRIRPGMLHPHPGSDFYGQRNDRGWPRFRSKHMSADEIENILRIQ
LAATHSSDPYVEDYYYQACLSIKSAESKLKHHFCPTNLRDSSSKPRSSNEQHAFLQVDAL
GRVSFSSIRRPRPLLEIDPPKSTSGDSSESKLSEKPLEQEPMLAARVTIEDGMCLLLDVD
DIDRFLQFNQLQDGGVQLRQRRQVLLEGLASSLQLVDPLGKNGHPANLSPRDDFVFLRLA
SLPKGRKLLLKYLQLLNPGELTRVVCMAILRNLRFLFGNLPPDTGALATTTSLAKTVSLC
VCSMELKALAACLASVVCSSEHPPLRPIGSPSSDGASVILKSVLERATELLRDSHSAVSC
SAPNRAFWQASFDAFFGLLTQYCFSKYDSVVQSFLAQQMTNGDSGSDLAKAISREIPVEL
LRASLPHTNEQQKKVLLEFTQRSMPIPAVAASASGGGNLMP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggatggatatggcggcggcgggggcggtggtggaggcagtattggtgattcgtctaag
attcaggatcttacaccgtttggctcaaaaatcctagattcaggtgaggatgagtttgat
gcatcgaggtatgaattctttggtggcgaagtaatggaggaggttgaacttgggggattg
gaagatgaagaggatgatattgttgcattcgggctaggggaagaaggatttctgttggac
aagggagaggatgatgcattgggacccctgtcagacattgatgatctttctagcacattt
ttgaagttgaacacagatgtcaatctacctacaagtacaggtggtggcagagattggcgg
ctcagagaaagttcatcggctgcagagtttccgcctggtttggattaccctaattggttt
gataagcatggttatgatgctgaatcttttcaggaaagccagaaatggccctcggcacat
tccccatctgcccactttatggagcccaaatcattgtcccgagcatcctcataccctgaa
caactgcagcgtcctccacaacaaagcctacatcatcagcattctttcgaaccaattctt
aacccaaaattaccattcactacatacccaccccctggcggccgattgcagcaaggtttg
ccgaatgaccagcctggccatcctaatatcccttatcacccgccagtagtgtcatccggt
ctttctactttcccaaatcctcagcttaaacttaatcctgtgcctcatggatcacagttt
ggtggaaattttcctcagttacctcatggtcgtcccccggttaacagtcagctgcaaaat
cagtttgcggcgcaaagtggcctacaccctggaaatcattctggtctcccgaacaatttt
ccgccgcaaaagtttcctcaccaaaatggtctaatgcctgcacagctgcgacctctgcac
tcccagcaaccgaggatgaagcttccgtatcacggttcctttggtcatctacccgggccg
cattctcaacttctgaattctcagctttctcagtcgcctcctatgctcaacaactttgac
atgctcgggttaccggatttgagagatcaaagggctatgcaacatcagagaattcgacca
ggtatgcttcatcctcatccaggctctgatttttatggccagaggaatgatcggggatgg
ccaaggtttagatcgaagcacatgtctgcggatgagattgaaaatattcttaggattcag
cttgcagctactcacagcagcgatccatatgtagaggattattactatcaagcttgcctg
tcgataaaatctgctgaatctaagctgaaacatcatttctgcccgacgaatttgagggac
agttcttctaagcctcggagcagcaacgagcagcatgcttttctacaggttgatgctctt
ggaagggtttcgttttcttcaatccgcaggccacggccacttctagaaatcgaccccccg
aaatcaaccagtggggacagttctgaatcaaaactttctgaaaagccactagaacaagaa
ccgatgcttgcagcccgggtgactatcgaagacggtatgtgccttctactcgatgttgac
gatatcgacagatttctacagtttaatcagctccaagatggcggggttcagttgaggcag
aggagacaggttctgctcgaaggtttagcgtcgtcacttcagcttgtcgacccactcggg
aaaaatggccatccggctaatttgtctcctagggatgattttgtattcttacggctagct
tctctacctaagggccggaaactccttttgaagtatcttcaacttctaaaccccggcgag
ctcacccgagtcgtctgcatggcaatactccggaatctgaggtttttattcggcaacctt
cctcccgacaccggagctctcgcaacaaccaccagccttgccaagacagtgtcgttgtgc
gtctgcagtatggagcttaaagctctcgccgcttgtctcgcatccgttgtgtgctcgtct
gagcacccccctctgcgccccatcggcagtccttccagcgatggagcgtctgttattctc
aaatctgtgctcgagagggcaaccgagctgctccgagactctcattctgccgtcagttgc
agcgcgcctaaccgagctttctggcaggcctctttcgacgccttcttcggccttctcact
cagtactgctttagcaaatatgactccgttgtgcaatccttccttgcgcagcagatgacg
aatggcgacagtggatctgacctcgccaaagcaatcagcagggaaatacctgtcgaactt
ctccgggcgagccttccccacactaatgagcagcagaaaaaggtcctcctggaattcaca
cagcgatcaatgccgattccggcggtggctgccagcgcctccggtggcggcaatctaatg
ccgtga
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