Andrographis paniculata: 127253332
Help
Entry
127253332 CDS
T08689
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
apan
Andrographis paniculata
Pathway
apan04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127253332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apan04121
]
127253332
Ubiquitin system [BR:
apan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127253332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_5
Transp_inhibit
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
127253332
NCBI-ProteinID:
XP_051133832
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MNQECKKSKGILSNSANSDGSSHRHLSFPDEVLEKVLSLIDSHKDRSSISLVCKDWYNAE
RWTRSSLFIGNCYSVSPEIVAKRFPRIKRVKLKGKPRFSDFNMLPPDWGANVHSWLVMFS
KVYPFLEELWLKRMTINDESLHLIASSFPQFKSLYLASCEGFTDDGLKAITSHCRNLVEL
NIKDNITEGVGGGWLSCFPDDFTSLEVLNFASINCEVSFDALERLVSRCRSLRVLRVNES
ITLNQLQRLLVHAPQLMELGTGSFWQPLTPRQYKETKSVFSKCKNLQSLSGLWHATALCL
HVLYGACANLTFLNLSDAFLKSDELANLLSHCPNLRRLWVIDTVEDKGLEAVGSYCPLLE
ELRVFPLDPYDLDYYLGVTEQGFMAVSRGCPKLHYVLYFCRRMTNAAVATIVQNCPDFTH
FRLCIMNPREPDYLTNDPMDEAFAAVVRTCTKLRRLSVSGLLTDWAFECIGTYAKNLETL
SVAFAGNSDKGMQYVLQGCPKLRKLEIRDCPFGDAALLSGIEKYERMRSLWMSTCDVTMD
GCKMLAKQKPRLNVEAIKDENNNGSLPDKVYVYRSVAGPRKDIPSSVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagagtgcaagaaatcgaaagggattttgtcaaactcagccaattccgatgga
tcgagccaccggcacttgtccttccccgatgaagtgttggaaaaggtcctctccctcata
gattcacacaaggacaggagctcgatttctcttgtgtgtaaggactggtacaatgctgag
agatggacaagatccagtctttttattggaaactgttattcagtttctcctgaaattgtg
gccaagaggtttccgaggattaagagggtcaaactcaaagggaagccaagattttctgat
ttcaatatgcttcccccagattggggtgctaatgtgcactcttggctggtcatgttttcg
aaggtttatccatttctggaggagctgtggctcaagagaatgaccatcaatgatgagagc
ctgcatctcattgcgagttcgtttccacaattcaaatccttatatttagcaagctgtgag
gggttcactgatgatgggctcaaagccattacctctcactgcaggaacttggttgagctc
aatataaaggacaacataacagaaggtgtcggtggaggttggctgagttgcttccctgat
gacttcacgtcgctggaagttctaaattttgccagcatcaactgtgaggtcagctttgac
gcacttgagcgactcgttagtcgttgcagatcattgagggttctaagggtgaacgagagc
attactttgaaccaactgcaacggctgctcgtgcatgctcctcaattaatggagctcggg
actggctccttctggcagccgcttacgcctcgccaatacaaggagactaaaagcgtcttc
agtaaatgtaaaaacttgcaatccctctcgggtctatggcacgccactgctctctgtctc
catgttctttacggcgcttgtgctaatctgactttcttgaatttgagcgacgcgtttctc
aaaagcgatgagcttgcaaaccttctttctcactgccctaatctccggcgcctttgggtc
attgacactgttgaagacaaggggcttgaggctgtcggatcctactgccctctgctcgaa
gaactccgcgtcttccctctcgatccttacgatctcgattattaccttggtgtgacagaa
cagggctttatggctgtgtcgcgcggatgtccgaagctccactatgtcctatacttttgt
cggaggatgaccaatgctgccgtcgccacgatagtgcagaactgtcctgatttcacccac
tttcgtctctgcataatgaatccgcgcgaaccggactacctcacaaacgacccaatggac
gaagcctttgctgctgtggttcgaacctgcaccaaactccggaggctttcggtttcgggc
cttcttactgactgggcattcgagtgtatcgggacatatgcgaaaaatctcgagacgctt
tcggtggcgtttgctggcaacagtgataaggggatgcaatacgtgctccaaggctgtcct
aaactgaggaagctcgagatcagagattgcccgttcggagacgctgctttgctgtctgga
atcgagaagtatgaaagaatgcggtccttatggatgtcgacctgtgatgtgactatggac
ggctgcaagatgcttgcgaagcaaaagccgcggcttaatgtcgaagcaatcaaagacgag
aataacaatggctctctacctgacaaagtttatgtctatcgatccgttgcagggccgaga
aaggatattccctcgtcggttcttacactctaa
DBGET
integrated database retrieval system
