Andrographis paniculata: 127253350
Help
Entry
127253350 CDS
T08689
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
apan
Andrographis paniculata
Pathway
apan04120
Ubiquitin mediated proteolysis
apan04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127253350
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127253350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apan04121
]
127253350
Enzymes [BR:
apan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127253350
Ubiquitin system [BR:
apan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127253350
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127253350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
EIF3I
WD40_MABP1-WDR62_2nd
zf-C3HC4_2
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
zf-C3HC4
Beta-prop_CAF1B_HIR1
Beta-prop_EML
zf-C3HC4_3
zf-RING_2
WD40_like
Beta-prop_WDR75_1st
Beta-prop_DCAF12
WD40_RFWD3
zf-RING_UBOX
WDR90_beta-prop_4th
zf-C3HC4_4
Beta-prop_WDR35_TULP_N
U-box
Beta-prop_SCAP
zf-RING_5
Beta-prop_IFT122_2nd
DUF1664
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
127253350
NCBI-ProteinID:
XP_051133864
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MGGGGGGGESSSVGALVPTVKSEPVDSSAEAPLALPPPSEAPEKEQDAEEEELEVDKDIL
CPICMQIIKDAFLTACGHSFCYMCIAIHLQNKSDCPCCSHFLTTNRLYPNFLLNKLLIKT
SARQIAKTSSPLEQLRQALEQGCEASVKELESLLHLIAERKSKMEQEEAETNLQILLEFL
HCLKKKKLDELNEIQSDLKYIKEDIHAVERHRIELYRRRDRYSAKLRMLVDNPIPQPAWP
SLMNKYSGAPFSKKGMTPVQGRLICTGSQNRKSDAKPPASPFVTRKDAHGGSDPQNGTQC
GLALARKRRVHAQFTDLQECYLQKRRYWARLSLEQQMQERDSHGLKKEGYTEGLEDFQSV
LSTFTRYSRLRVVAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKIFEFSSVVNE
SSDVQCPVAEMSTRSKLSCLSWNKYTKSHIASSDYDGIVTVWDVTTRQSMMEYEEHEKRA
WSIDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICSVKYNPSSSFHVAIGSA
DHHIHYYDLRNVAQPLHIFSGHGKAVSYVKFLSDNELASASTDSTLRLWDVKDNIPLRIF
RGHTNEKNFVGLSVNREYMACGSETNDVFVYHKAISKPAAWHRFMNSDADEREEDTGSYF
ISAVCWKSDSPTVLTANSQGTIKVLVLAP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggaggaggaggaggcgagagttcgtcggttggcgcgctggtgcctacggtc
aagtcggaacccgtagattcctcagcagaggcgccgctcgctctgcctccgccatcggag
gcgccggagaaggagcaggatgcggaggaggaggaattggaggtggataaggatattctc
tgcccgatttgcatgcaaataataaaggatgcctttctgacggcgtgtggacacagcttt
tgctacatgtgtatcgcgattcatcttcagaataagagcgactgtccttgttgctctcac
ttccttaccacaaatcgtctctatcctaatttcctcctcaacaagttactaataaaaacc
tctgcccgtcaaatagctaaaacttccagtcctttggaacaacttcgccaggcgctagaa
cagggatgcgaagcatctgtcaaggagcttgagagcctcttgcatcttattgctgagagg
aaaagtaaaatggagcaagaagaagctgagactaatctacagattctgctggaatttctg
cattgtttgaaaaagaaaaaactcgatgagctcaatgagattcaatctgacctcaagtat
attaaagaagacattcatgctgtggagagacatcggatagaattgtatcgacgaagggat
agatattccgcaaaactgagaatgcttgttgataaccccattccacaaccagcatggcca
tcattgatgaataaatatagtggtgctcccttctcgaagaagggcatgacaccagttcaa
ggacgcttaatttgcactggctctcaaaacagaaaatctgatgcaaaacctccagcaagc
ccttttgtcacaagaaaggatgcacatggaggatcagacccccaaaatggtactcaatgt
ggactggcgttggcaagaaagaggcgggtccatgcacagttcactgatctacaagaatgt
tacttacaaaaacgaagatattgggcaaggttatctctagaacagcaaatgcaagaacgg
gattcacatgggttaaagaaagaaggttacacggaaggacttgaggattttcagtctgtt
ttgtcaaccttcaccagatacagtcggctacgagttgttgctgaactcagacatggagat
ttgtttcattcagctaatattgtatcaagtatagaatttgacagagacgacgaactcttt
gctacagctggagtgtcccggcgcatcaagatttttgagttttcatcggtagttaacgag
tcatccgatgtacaatgcccagttgcggaaatgtccacacgatcaaaactcagttgttta
agctggaacaaatacacaaagagtcacatagccagtagtgactacgatggcatagtaaca
gtttgggatgtgactactcggcagagcatgatggaatacgaggaacatgaaaaacgtgca
tggagcattgatttttcccgcacagagccctcaatgcttgtctccggtagcgatgactgc
aaggtcaaagtctggtgtacaaaacaggaggcgagtgtgctcaatatcgacatgaaagcc
aatatctgttctgtaaaatacaacccttcatccagctttcatgtagcgattggttctgca
gatcatcatattcattactatgacttgagaaatgtcgctcagccattgcacatattcagt
gggcatggaaaggcggtatcatatgtgaaatttctgtccgataatgagctcgcttctgca
tcaactgatagcacattacgcctctgggatgtcaaggacaacattccactgcgcatattc
cggggacacacaaatgagaagaattttgtgggcttatcagtgaacagggaatatatggcc
tgtggcagcgaaacaaacgacgttttcgtgtatcacaaggctatatcgaaaccagcagca
tggcaccgattcatgaactcggatgcagacgaacgcgaggaggacacgggctcctatttc
atcagcgccgtgtgctggaaaagtgatagcccgaccgtcctgacggcgaacagccaagga
acaataaaggtcctagtacttgctccttga
DBGET
integrated database retrieval system
