Andrographis paniculata: 127253505
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Entry
127253505 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127253505
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127253505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127253505
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127253505
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127253505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
127253505
NCBI-ProteinID:
XP_051134130
LinkDB
All DBs
Position
Unknown
AA seq
2411 aa
AA seq
DB search
MIPLSSKISGQIRFLLQSLNDSNADQIFQELSQCSLFGAEGCILLLQTCFNHLNIYEEDL
KNLSLHPLYTSIFKHILDRHHFSTVLCKSLREDTAITEEFLQNLAGALRLSLPEKIGVGL
ALSDSENQDVKNCGKKFCMNQLAELSANPVPFESTELVQNILMFLSRSEGLAKYVDSFMQ
MLSLVQLKEGDQFVLVPFLPEDQRSDNFFRHLELYSEGDEDDFDAILVEMEKEISMADVM
SELGYGCTADVSQCKELLSLFLPLSETTIAKILGTIARTYAGLDDNQNAFATFHSALGGN
SGIEQPPLTAWNVDVLVDSIKQLAPGLNWINVMDKLDHEGFYIPNEAAFSFFMSVYRRAC
QDPFPLRAICGSVWKNAEGQLSFLKFAVSMPSEIFSFAHSERQLTYDDAVNGHTFQPGQT
NHAWSCRDLLEVLCQLSEKGHASAVRSILEYPLSHCPEALLFGIAHVTTPYNLIQNEVAS
AVLPVALKSISGNSLVHKMWHVNSTLLLRGFINSISFDPENISRILDACHELKILSLVLD
MLPFYYGIRLAAVASKKEIMDFESWLNSHLLNNKEAFYEECLKFLKDVQIGAPDVSANRI
HPSVALLNIYLDSCPAVIKVLQSRASAISSAQFSEEMEKLDVSHMRANSRARSADSAAGD
NVADDIEAEANVLFHQMFSGQMAVDGMIQMLTHFKESPEKREQLIFECMIANLFEEYKFF
PKYPERQLRIAAILFGLLIKHQLVTHLTLGIALRAVLDALRKPTDSKMYAFGSRALEQFV
DRLIEWPQYCNHILQISHLRTANPELVAYADRALSRISAAHGELDVHSFSSDQHHGPIQS
SAMSMEIPGSSFPLIGHASTLSGLQISSGQLPQRPANSLDERKTSALSSYMKPAYTTLGQ
LAVPSGDGTNIQKSHSGIGVGSLHSASPGFPRSSRPTSTRFGSALNIETLVAAAERRATP
IEAPASEIQDKVSFIINNLSTANVESKAKEFADILNEQYFPWFAQYMVMKRASIETNFHD
LYLRFLDKVNSKPLNKEIVQATYENCKVLLGSELIKSSVEERSLLKNLGSWLGKITIGKN
QVLRAREIDPKSLILEAYEKGLMIAVIPFTSKILEPCSNSLAYQPPNPWTMGILGLLAEI
YAMPNLKMNLKFEIEVLFKNLGVDLKEVAPSSLLKDKYREVDGNPDFSNKDVGNSQPTVV
NDAKPGVISTMNQIDVPLEATSAQHPGGHSRIISPYGTPLQHPPGPLTEDEKMGSLGFSD
QLPSAQGLLQGQTQFSVSQLPLPTANIEQQVVVNKKLQAYGLHLHFQSVLPIAMDRAVKE
IVSSIVQRSVSIATQTTKELVMKDYSMEPDETLIRNAAHLMVARLAGSLAHVTCKEPLRG
SISAQLRNSLQGMGISTELLEQAVQLVTNDNLDLGCVLIEQAATEKAVQTIDGDIAQQLN
SRRKPRDAAGAGYVDTGSYSPGQLGLPESLRPKPGQLSQYQQRVYEDFARLPGQKSGNQQ
GSNPPPVGPSVSSASGGVTHQFAAPSGQISSSLYSSSHVNAGAGAVPQTLEIDSDEAEPV
GSQIPSVPSTHMMGDVSQSLESDTVPSFPSASTSDLQVLETASPAKESGATVQPVTASLA
SERPGSSVSDPLLTTGEALDKYQTISEKLENLMANDSKDAEIQGVIAEVPAVILRCISRD
EAALAVAQKAFKGVYENASNSAHVDAHLAILSAIRDVSKLVVKELTSWVIYSEEDRKFNK
DITIGLIRSELLNLAEYNVHMAKLLDAGRNKPATDFAISLIQALVVNDSKVISELHNLVD
ALAKLAARPGSPESLQQLVEIAKNPANAAVLSPMAIGKEDSTRTPRDKKATGFSGGSREE
YATSELVDSDPAGFHEQVSALFAEWYQICELPGANDAACARYVLHLQQRGLLKGDDTSDR
FFRRIMELSVSHCLSSEVMNSGSSQPHQGQPLSFLAIDIFAKLVFSVLKFSPVDQASSKL
SLLPKVLAVTVKFIQKDAEEKRASFNPRPYFRLFINWILDLCSLEPVFDGANFQVLTALA
NSFHALQPLKVPGFSFAWLELISHRSFMPKLLVANAQKGWPYLQRLLVDLFQFMEPFLRN
AELGDPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIVLSAFPRNMR
LPDPSTPNLKIDLLAEISLTPRILSEVDAALKAKQIKADVDEYLKLRPQGSPFVAELKQK
LLLSPAEVARAGTRYNVPLLNSLVLYVGVQAIQQLQARSPSHSQSMANMNAFLVSAALDI
FQALIMDLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAESNQEMIQEQITRVLLE
RLIVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRSCGGPKPVDESV
VSGSGIPEGMH
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgattccgttgtcctccaagatttcaggtcagattcggttcctgctccagagcttgaat
gactccaacgccgatcagatttttcaagaactctcccagtgttcattgtttggagcggag
ggttgcatattgctgctgcaaacttgtttcaaccacctgaatatctatgaggaagatttg
aagaatttgagtctgcatcccttgtacacttcaatattcaagcatatcctggacagacat
cactttagcacagtgctctgtaaatcattgagagaagatacagcaatcactgaagagttt
ctgcaaaatctggctggtgctctgcgcttgtcattacctgagaaaattggagttggtctt
gcactgtctgattcagaaaatcaagatgttaagaattgtggaaaaaaattctgtatgaat
cagcttgcggagttgtctgctaatccagttccattcgaatcgactgaacttgttcaaaac
atcctcatgtttctgagtcgatctgaaggcctcgcgaagtatgtagattcattcatgcaa
atgttatctctagtccaattgaaggagggtgatcaatttgttctagtgccttttctacct
gaagatcaacgttcagataacttcttcaggcacttggaactctacagcgagggtgatgaa
gatgattttgatgctatcctagtagaaatggaaaaagaaatttccatggctgatgtgatg
agtgaattaggatatgggtgcacagctgatgtttctcagtgcaaagaactattatctctt
ttcctaccgttgtctgaaaccactattgcaaagattcttggtacaattgcccgaacttat
gcaggtcttgatgacaaccaaaatgcctttgctaccttccattctgcccttggtggcaat
agtggaatcgagcaaccacctttgaccgcttggaatgttgatgtccttgtggattcaatc
aagcaacttgcacctgggcttaactggataaatgtcatggataagctggatcatgaggga
ttttatatccctaatgaggcagcattttccttttttatgtctgtttacaggcgtgcatgc
caggatccatttcctctccgtgcaatttgtggctcggtttggaagaacgctgagggtcag
ctatcatttctaaagtttgcagtatctatgccttctgaaatattttcatttgctcactct
gagaggcagttgacttacgatgatgctgtgaatggacatacatttcaaccaggccaaaca
aatcatgcctggtcctgtcgtgatctgctggaggtgttgtgccagctatctgagaaaggc
catgcaagtgctgtgcgatccatccttgaatatccactgagtcactgcccagaagcttta
ctttttgggatcgcccatgtgactactccatacaatctcatccagaacgaagtggcttct
gctgttctccctgtggcactcaaaagtatttctggaaacagtttagttcataaaatgtgg
catgtaaattcaaccctgttattgcgaggatttataaattcaataagctttgatcctgaa
aatatctcaaggattttggatgcttgccatgagctaaagattctctctctagtgctggat
atgttgcctttttactatgggatccggttagctgcagttgcttctaagaaagaaatcatg
gactttgaaagttggttgaacagtcacttgttgaataataaagaagctttttatgaggaa
tgcctaaaatttcttaaggatgttcagattggagctccagatgtttctgctaatcgcatt
catcccagtgttgctctgttgaatatttatttggattcttgccctgctgttataaaggtc
ctccagtctcgggctagtgccatttcctcggctcagttctccgaggaaatggaaaaactg
gatgttagtcatatgcgtgcgaactcaagagctaggagtgctgattcagctgcaggtgat
aatgttgctgatgatatcgaggcagaggcaaacgtactctttcatcaaatgttttctggt
cagatggctgtcgatggtatgattcaaatgcttacgcacttcaaggaatctccagagaaa
agggagcaattgatttttgagtgcatgattgccaatctattcgaggaatacaagtttttc
cccaagtaccctgaaaggcagctccgaattgccgcaattctatttggtttacttatcaag
catcaacttgttacacatctaacccttggaattgctttacgagctgttttagatgctttg
aggaaaccgactgattcaaaaatgtatgcctttgggagccgggcattggagcagtttgta
gatcgcctaatagagtggccacagtactgcaaccatatattgcagatatcacacttgcgt
actgcgaacccagaacttgttgcatacgctgatagggcacttagcagaatttcagcggct
catggtgagctggatgttcatagtttttcttctgatcaacatcatggcccaattcaatcg
tcagctatgagcatggagattcctggctcatcatttcccctaattggccatgctagcact
ctgtctgggctgcagatttcttctggccaacttccacaaagaccggcaaattcactagat
gagaggaaaacttctgctttgtccagttatatgaagcctgcgtacaccacattaggtcag
cttgcggttccttctggagacgggactaacattcagaagtcacatagcggaattggtgtg
ggatctctgcattctgcttcgcctggttttccacgttcatctcgacccacctcaacaagg
tttggttctgccttgaacattgaaacacttgttgctgcagcagagagaagagcaacgccc
atagaggctcctgcatcagagattcaggacaaagtatcgtttattataaataacttatct
actgcaaatgtggaatccaaagctaaggagtttgctgacatactaaatgagcaatacttc
ccatggtttgctcaatacatggttatgaaaagggcaagcatcgagacaaattttcatgat
ttgtacttaaggttccttgataaagttaattctaagcctttgaataaggagattgttcaa
gccacttatgaaaactgcaaggttctattaggatcagaacttataaagtcaagtgtagaa
gagcggtcattgctgaaaaacttaggaagctggcttgggaagattacaattggcaaaaac
caagttctaagggcgcgagagatagatcccaagtctctaattttggaggcctatgagaag
ggacttatgatagctgttatcccttttacctccaagattctagaaccatgctccaatagc
cttgcatatcaacctcccaatccttggactatgggtattcttggattgcttgctgaaatt
tatgcaatgccaaatttgaaaatgaatcttaaatttgagattgaggttctctttaaaaat
cttggtgttgatcttaaagaggttgcaccatcatctttgctaaaggataaataccgagaa
gttgatggaaatccagatttctccaataaagatgttggaaattcgcagccaactgtggta
aatgatgcgaaacctggagtaatatctacaatgaatcaaattgatgttccccttgaagct
acatctgctcaacatcctggtggccattcaagaataatatctccgtatggcacccctctc
caacatccacctggaccattgacggaggatgagaagatggggagtttgggtttttctgac
cagcttccttctgcacaaggccttctacaaggacagacacagttttcagttagtcagctt
cctctgccaactgctaatattgaacagcaagttgttgtcaataagaagcttcaggcttat
ggtctacacttacattttcagagcgtgcttccaattgccatggatagagctgttaaggag
atagtgtcgagtattgttcaacgaagtgtatctatagcgactcagacaaccaaggaactt
gttatgaaggactattccatggagcctgatgagactctaataagaaatgcagcacatttg
atggtagcaagattggcgggcagtctggcccatgtaacctgcaaggaacctctgcgaggt
tcaatatctgctcagcttaggaactcactccagggaatgggcatatcaactgaacttctt
gaacaagcagtacaacttgtaactaatgataatctggaccttggctgtgtgttgattgag
caagctgctacagagaaggcagtacaaaccattgatggagatattgctcaacaacttaat
agtcggagaaagcctagagatgctgctggtgcaggatatgttgatacaggctcatattca
ccaggccaattggggcttccagagtcccttcgccccaaacctggccagctatctcaatac
caacaacgtgtttacgaggattttgctcgccttcctggacaaaaaagcggaaaccaacaa
ggttcaaatcctccacctgttggcccatctgtatcgtctgccagtggtggagtgacccat
caatttgcagctccatctggccaaataagttcaagcctttattcatctagccatgtaaat
gctggagctggtgctgttccacagactctggaaattgattctgatgaggcagagcctgtt
ggttctcagattcctagtgttccatcaacacatatgatgggtgatgtttcacaaagtcta
gaaagtgatactgttccttcatttccttctgcttcgacttctgatctgcaagtgctggaa
actgctagccctgctaaggagtctggagctactgtgcaacctgttactgcatctttggct
tctgaacgtcctggaagtagcgtctccgacccattgttaaccacgggtgaggcgctggat
aagtaccagacaatttcagagaagcttgaaaatctcatggctaatgattcgaaggatgct
gaaattcagggcgtaattgcggaggttcctgcagttatcctcaggtgcattagtagagat
gaagctgccttggctgtggctcaaaaggctttcaagggcgtatatgaaaatgcatctaac
agtgctcatgttgatgcccatctggcaatactgtctgccattcgtgatgttagcaagctt
gtagttaaggagctcactagttgggtaatatactctgaggaggacaggaaattcaataaa
gatatcacaattggccttatccgcagtgaacttttgaacctggctgagtacaatgttcat
atggctaagcttcttgatgcaggaagaaataagccggcaacagattttgccatttctctt
attcaagcattggttgtcaacgattcgaaagttatatcagaactgcacaatctagttgat
gctttggcaaagcttgctgcaagacctgggtctccagagtcgttacaacagctggttgag
attgccaagaaccctgccaatgctgcagttttgtctccgatggctattggaaaagaagac
agtacgagaactcctagggataaaaaggccactgggttttctggaggaagccgagaagag
tatgctacttcagagttggtggattcagatcctgctggttttcacgagcaggtgtctgcg
ctgtttgctgaatggtatcaaatatgcgagcttccaggagcaaatgatgcagcttgcgcc
cgctatgtcctacacttacagcagagaggcctgcttaaaggggacgacacctcagatcgg
tttttccgccgaatcatggaactttctgtgtcacactgtttatcttctgaggtcatgaat
tctggctcatcccagccacatcaaggacagccattgtcattccttgctattgatatcttt
gcaaagctagtgttttcagttctgaagttctcccccgttgatcaggcgtcaagcaaactc
tctcttctgcccaaggttcttgctgttactgtgaagtttattcaaaaagatgctgaagag
aagagggcatccttcaatccaaggccatactttaggctgtttattaattggattcttgat
ttgtgctctttggaaccagtatttgatggtgcaaactttcaggtgctgactgcattagca
aattctttccatgctctacaacctcttaaagttccaggcttcagctttgcatggcttgag
ctgataagccacaggagtttcatgccaaaattactagtagcaaatgcacagaaaggatgg
ccttatttgcaaagattgttggtagacttattccagtttatggagcctttcctgaggaat
gctgaacttggagatccggttcattttctttacaaagggacactgagggtgttgttggtt
ctactacatgattttccagagttcctttgtgattatcattttagtttttgcgatgtcatt
cctccaagctgcatacagatgcgaaacattgtacttagcgcatttccccggaatatgagg
ctgccagatccttctacaccgaacctaaagattgatctgttggctgagattagtctgact
ccgcggatcctctcagaagttgatgcagctcttaaagcaaagcagattaaggcggatgtg
gatgaatatctcaagttgagaccacaagggtccccttttgttgctgagttgaagcagaaa
ctactactctctccagctgaagtggctcgtgctgggactcgttacaatgttcctcttctc
aactcccttgtactgtatgttggggtgcaggctattcagcaactccaagcaagatcccct
tctcattctcagtcaatggctaacatgaatgcattcctggtgagtgccgctctggacatt
ttccaggccctgataatggatctggacaccgagggtcgctatctgttcctgaatgctatt
gccaaccaattacgatatcccaacaaccacacgcactacttctctttcattcttctctat
ctgtttgccgaatcgaaccaggaaatgatccaggagcagatcacccgagtcctgttggaa
cgcctgattgtgaaccgtccccatccatggggtcttctaattactttcatagagcttatc
aagaacccgaggtacaacttctggagccggagtttcacaagatgcgcacctgagattgag
aagctgtttgaatcggtgtcgaggtcgtgtgggggaccgaagcctgtggacgagagtgta
gtgtctggtagcggcatacccgagggcatgcattaa
DBGET
integrated database retrieval system
