Andrographis paniculata: 127253669
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Entry
127253669 CDS
T08689
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
apan
Andrographis paniculata
Pathway
apan03030
DNA replication
apan03410
Base excision repair
apan03420
Nucleotide excision repair
apan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127253669
03410 Base excision repair
127253669
03420 Nucleotide excision repair
127253669
03430 Mismatch repair
127253669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apan03032
]
127253669
03400 DNA repair and recombination proteins [BR:
apan03400
]
127253669
DNA replication proteins [BR:
apan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127253669
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127253669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
Rad17
RCF1-5-like_lid
AAA_19
PTCB-BRCT
RuvB_N
AAA_assoc_2
AAA_18
AAA_5
nSTAND3
AAA_14
Sigma54_activ_2
Zeta_toxin
RsgA_GTPase
BRCT_2
NTPase_1
NPHP3_N
AAA_24
TsaE
AAA_28
AAA_33
Motif
Other DBs
NCBI-GeneID:
127253669
NCBI-ProteinID:
XP_051134315
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MSQDIRKWFAKKQNKGDGNGNAPSPAKQSTPEKPPQSGKMVQGIQECSGRRKTSKYFAKD
GQDAKDEMDVDEVPSKKKAQKGRAESTGDVKSPPLKKAHKLEEEDGDEDFVTPASRKSSA
DPTPNKKLKSSSGKGVARKLVEESDEDEGETTKSKSKSVGRGRGRGSKGSSATSTAVKVD
ADEADEDMDDKESVKPAGRGRGGRGAPAGGRGRGGFMNFGERKDPPHKGEKEVPEGAADC
LNGLTFVISGTLDSLEREEAEDLIKRHSGRVTGSVSKKTNFLLCDEDIGGRKSEKAKELG
TSFLTEDGLFDMIRASNKSKPSVQDSKKSVDKAAPPPKSSPQKSEKSKQQAGNIVASAGA
KGSASRVTSSKAASKSKDRPTAQSLLPWTEKYRPKVPNDIVGNQSLVKQLHDWLAQWNNN
FLNTGKMGKGKKQNDSSAKKAVLLSGTPGIGKTTSAKVVSQMLGFQTIEVNASDSRGKAN
AKIGKGIDGSTSNSVKELVSNEALSLKMERSPQQKTVLIMDEVDGMSAGDRGGVADLIAS
IKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQMAKRLSQIANLEGLQANEIAL
EELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQRLQSSSKDEDISPFTAVDKLFGFNA
GKLRMDERIDLSMSDPDLVPLIIQENYINYRPSSVGKDDNGMKRMNFLARAAESIGDGDI
VNVQIRRYRQWQLSQIGSLASSIIPAALLHGQREILEQGERNYNRFGGWLGKNSTMSKNY
RLLEDLHVHMLASRESNSGRSTLRLEYLSVLLKRLTNPLRELPKDEAVEKVVEFMDLYSI
SMEDFDTMMDISKFKGHPNPLDGIPPATKAALTRAYNKGSSSRVVRAADLITLPGIKKAP
KKRVAAMLEPVEGADEIGENEEEILSDAEDQEDESEDPEKKLQSDLENLNSKGIKVQMDL
KKGSSGGSGKKAPAGRGRGAAAAGTSSDGKGKGGRGSGSAASKRKR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatataagaaagtggtttgcgaagaagcagaacaagggtgatgggaatgga
aatgcaccatctccagccaagcaatctacacccgagaagcctccccaatctgggaagatg
gtacaaggaattcaagaatgttctggaagaagaaaaactagcaaatattttgccaaggat
gggcaagatgccaaagatgagatggatgttgatgaagttccttcaaaaaagaaggcacaa
aagggtagggcagagtcaacaggtgatgtcaagtccccacctctaaaaaaagctcacaaa
cttgaggaggaggatggagatgaagattttgttacacctgcttcaagaaagagctcagcg
gatcccactccaaacaagaaattgaaaagtagttctggtaaaggggttgctcggaaactt
gttgaagaaagtgatgaagatgaaggtgaaaccacaaaatccaagtcaaaatctgttggc
aggggtagaggtcgtggctcaaaaggttcttcagccacttcaactgctgtgaaagtggat
gctgatgaagcggatgaggatatggatgataaggaatctgtaaaacctgctggacgaggc
cgtggtggaagaggagcaccagcaggtggtaggggtagaggtggcttcatgaactttggc
gagaggaaggatccgcctcataaaggagagaaggaagttccagaaggtgctgctgactgt
ttaaacgggttgacttttgtcatcagtggaacccttgacagtttagagagagaagaagct
gaagatttgataaaacgtcacagtgggcgcgttactggatctgtcagcaaaaagacgaat
ttccttctctgtgatgaagatatcggtggaagaaagtctgaaaaagcgaaagagcttggc
acttctttcctcactgaggatggtttatttgatatgattcgagcatcaaataaatcaaaa
ccttctgttcaagattcaaagaaatcagtggataaagctgcaccaccacccaagagtagc
cctcaaaagtctgaaaaaagtaaacaacaagctggcaatattgttgctagtgcaggtgca
aaaggatcggcatctcgcgtcacatcttccaaagctgcttctaagtcaaaagatcgacct
actgcgcaatccttgttgccatggactgaaaaatacaggccaaaggttcccaatgatatt
gttgggaatcagtctctggtgaagcagcttcatgattggttggcacaatggaacaataat
tttctcaacactgggaaaatggggaaggggaaaaagcagaatgactcaagtgctaagaaa
gctgtgcttttgagtggcacacctggcattgggaagaccacttcagcaaaggtggtcagt
cagatgcttggttttcagacaatcgaggttaatgctagtgacagtcgtgggaaggcaaat
gctaagattgggaaagggattgatggaagcacatctaattctgtcaaagaacttgttagc
aatgaagccctcagtcttaaaatggaacgttccccgcaacaaaagactgtccttattatg
gatgaggtagatggtatgtctgctggagataggggtggagtagctgatcttattgccagc
attaagatatcaaagattcctataatatgtatttgtaatgatcgttacagtcagaaactc
aagagccttgtaaactactgtttacttctcaacttccggaagccaaccaaacaacagatg
gccaaaaggttatcacagattgcaaatttagaaggtcttcaagcgaacgagattgcactt
gaggaacttgcagaaagagttaatggcgacattcgtatggcactcaaccagctacagtat
atgagtctttcgatgtcggttattaaatttgatgatatcaaacagcgccttcaaagcagt
tcaaaggatgaagatatttcccccttcactgctgttgataagctatttggcttcaatgct
gggaagttgcgaatggatgagagaatcgacctcagtatgagtgatcccgatcttgttcca
cttattatccaggaaaattatatcaactataggccaagttcagttggtaaggatgataat
ggaatgaaaagaatgaacttccttgcccgggctgctgagtccattggggatggtgatatt
gttaatgttcagattcgaagatacaggcagtggcagctctctcagattggttcgcttgca
tctagtataattcctgcggctcttttgcacggtcaacgcgaaatacttgagcagggggag
cggaattacaatagatttgggggttggctaggtaaaaactccacaatgagtaaaaattac
agacttttggaggaccttcatgttcatatgcttgcttctcgggaatctaattctggaagg
tcaacattgcgccttgagtatctttctgttcttctgaagcggttaactaatcctttaaga
gagctgccaaaggatgaagctgttgagaaagttgtggagtttatggatttatactccatc
agcatggaggactttgataccatgatggatatatcaaaatttaaggggcatccaaatcca
ctcgatggcataccacctgccacaaaagcagcactcacaagagcttataacaaaggcagc
tcatcccgtgtggttcgagctgcagatttaattacactccctggaattaaaaaggctccg
aagaagagagttgctgcaatgctggaacctgtggaaggcgctgatgaaattggcgaaaat
gaagaagaaatcctctcagatgccgaggaccaagaggatgaatcagaggatcctgaaaag
aagctgcaatctgatctggagaatctcaattcaaaaggaatcaaagtgcaaatggattta
aagaaggggtcctctggcggcagtggcaaaaaggcgccagcaggccgtggcagaggtgct
gctgccgcagggacatcctcggacgggaaagggaaagggggccgtggctctggatcagca
gcctctaagcgaaagagatga
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