Andrographis paniculata: 127253972
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Entry
127253972 CDS
T08689
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127253972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127253972
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127253972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
Nucleoprot-TPR
TPR_MLP1_2
CCDC-167
CCDC89
Motif
Other DBs
NCBI-GeneID:
127253972
NCBI-ProteinID:
XP_051134755
LinkDB
All DBs
Position
Unknown
AA seq
2067 aa
AA seq
DB search
MALFLSEEEFRGCAGNAKLVAEKADAFIRELYAQIETVKAEADAASITFEQTSSLIEQKY
VSLSAEYSSLQSQFDELKSSSGKGASELEQLRSEKQQLLVQTIEKDGEIERLTTEASELH
KSKRQLMELLEQKDLEIGEKNATTKSYLDKIINLSEAVASKEARLGELESELGRMQATSA
RALQEKELLERHNKWLNDELTTKVDSLVQLRKANGELEVEMSSKLADADKKFQEISSSLK
WHKDRVKDMEDKLCSTEKELLATKDAAAAAEGRFSAEISTVNKLVDLYKESSEEWSKKAG
ELEGVIKALETHLNQVESEYKEKLEKEVSARKDMEKEFANLKEKLQTSEAELKKLRKENE
QKHLSLSCFTSNLPLPSADTNKIEDDRAIVPHIPAGVSGTALAASLLRDGWPLAKMYAKY
QEAVDALHHEQLGRKQTQAVLERVLYEIEEKAGAIMDEREEHDRLVEAYSTLNQKLQHSL
SEHSVLETTINELKANIKKQEREYAVAQKEITDLQKQVAVLLKECRDIQLRCGSAPHDDD
GLISGTIISLNAESNADDIISTRLLTFKDINGLVEQNVQLRSLVRNLSDQIAYKEAELKE
KYEDELKKHTSDTASKVNQVLKRAEEQAQMIESLHTSVAMYKRLYEEEHKLRALPSHLEE
AVPVQEQGSRGAMLLLESSSNATQKVQEHTFERLKSLEEDVAKSRGEIISMRAERDKYAL
EAQFAQEKLDRFMKEFEHQRQEHNGVLARNVEFSQLIVDYQRKLRESAEAVDASNELSRK
LKMEVSMLQHEKEILQNSEKRASDEVQSLSERVHRLQASLDTIHSTEEVREEARGIEKRK
QEEYISKIEREWADAKRELQEERDTVRNLTLDRESTLKNALRQVEELSKDLANAMQSVTA
AESRAAVAEARCSDLEKIIESATTKDSDGKEGAASSASSDKLLANYREEIEKLRREVQSS
SEHMLQYKSIAQVNEEALKQIEVAYQNFKNETDEAKRSLEAELHSLKERICELESECQQK
TAEAISANAGKDEALMGALSEISNLKDDCANKKSEIVVLESRISALKEDLEREHQRWRNA
QDNYERQVILQSDTIQELTKTSQALAAAQEEVAKLRKVADTLKSENNELKSRWEMEKLAI
EAYKNDADRKYDEINELNKILHSRLEALHIQAAEKERGTASSSQNLADDDGLQSIVSYLR
RSKEIAETEISLLKQEKIRLQSQLEIALKSSEEAQATLRMERAKSRSSVFSEEEFKSLQL
QVREVTLLRESNVQLREENRHNFEECQKLREAFQSAKIQNDNMENLLRDKDTELEAYRKE
IDMLKLEKAQLENRIDELVQKCKDVDVDDYNRMKESLQQMDASLKEKDAQLEEIKKHLSE
KQDAISLLEKDLDRTRTELSKKETRINDILQADASLKSEVEKLKRMNIASRRKYDNLLKE
KDDLNKEVQSLSKQLEEAKQAKQNTVDSAAEQALKEKEKEKDTRIQILEKTLERHREDLK
KEKEDLHKEKEKNQKMRKTLIDSRTIVTQEKTMLSDELSKHKQALKELQDEVEKLKSSGQ
PESTSVIQHSSVALLEDFASTYYQAVENFEQVSQSACVDPDSAALDAPPDNTSSAGQIVS
LANQTPPVPAATAPLARTSDDKNRRLATAKASAKIGRRLVRPSITRPKEPQGEVDMSEAD
ESNTGLSSQNAESQGHTATVPAPAASIRKRPSTSLSSEMQEDLPAPEETSPDSAAPLHKK
PKGSESLQEGGEEPGTAPGKLSEVLAVEEPSDAALSKDETVDVEREDFDATVEQGEDPAT
DEQMQVELPSETVETAEEKLDKPSETVMSDDQLRDQTEQDIQQIISESSGDREEGEMVAE
YGDNDDNNVANEMSGLGSDELQAAPQTGEPENTQITDPMSQANLESGEIDPSQTPPWEED
KIVDTTENIPDNASKLKEASPAPPDPATDIPATGSTVTATEEASTSSAVDAGSSEQGGST
PPQDTGTAKPVSPVSGSSTTINLQERARQRAHLRQAGMASSTSTTPGRARGRTIRGRGAR
GTTRGGRGQSSVVFSGIEDGITESIGQ
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtttttgtcggaggaagagttccgggggtgtgcggggaatgccaagctggtg
gcggagaaggcggacgcgtttattcgggagctctatgctcaaattgagactgtcaaggcg
gaggccgacgccgcttccattactttcgagcagacgtcgtctctgattgaacagaagtac
gtttcactttcagcggaatactcctccctgcaatcgcagttcgatgaactaaaatcttcc
tcgggaaaaggcgcttctgaacttgaacagctccgatccgagaagcaacaacttctcgtt
caaactattgagaaagacggggagattgagaggctgacaacggaagcgtcagaactgcat
aaatcgaagaggcagttgatggaattattggagcagaaggacttggaaattggcgagaag
aatgccactactaagagttatcttgataaaattatcaacttatcagaggcagtagcatca
aaggaagcacggttgggtgagctggagtccgaattgggacgaatgcaagctacttctgcc
cgcgctttgcaagaaaaggagcttcttgagaggcacaataaatggctcaatgatgagttg
acaactaaggttgacagtcttgtccagctgcgcaaagcaaatggagaacttgaggttgag
atgtcttctaagcttgctgatgctgataagaaatttcaggagatttctagttctttgaaa
tggcacaaggatagagtgaaggacatggaggacaaactttgctccacagaaaaggaattg
ttggcaactaaggatgcagctgcagctgcagaggggcggttcagtgctgaaatatcaaca
gttaacaagcttgtggacttatacaaggaaagctccgaggaatggtccaagaaagccggg
gagcttgagggagtcatcaaagcgttagaaactcatttgaatcaagttgagagtgaatat
aaagaaaagcttgaaaaggaagtgtcagcaaggaaggacatggaaaaggagtttgctaat
ttgaaggaaaagcttcagaccagcgaagcagaattgaagaagttgagaaaagagaatgaa
cagaaacatctttctcttagttgttttacatcaaacttaccactgccctcagctgatacc
aacaaaattgaggatgatcgagccattgtacctcatattccagctggtgtttctggaaca
gcattagctgcttcacttcttagggatggatggcctctggccaaaatgtatgccaaatac
caagaagctgttgatgcgttgcaccatgagcaactgggaagaaaacaaacccaagctgtt
ttggagcgagtgctttatgaaatagaagaaaaagctggagcaatcatggatgaacgagag
gagcacgatcgacttgttgaagcatattctactttgaatcaaaagctgcagcattcgtta
tctgaacattctgttctcgaaacaaccattaatgagttaaaggctaacataaagaagcag
gagcgggaatatgctgtcgctcagaaggagattactgacctccagaagcaggtggctgtc
ctcttaaaggaatgtcgtgatattcagttgcgatgtggatcagctcctcatgatgatgat
ggacttatttctggtactatcatatcactgaatgctgaatccaatgctgatgatatcatt
tctacacgtctgttgaccttcaaggatataaatggactagttgagcagaatgtgcagctc
cgcagtcttgttcgcaacctttccgatcaaatagcttataaagaagcagagttgaaggag
aagtatgaggatgagctgaagaagcacaccagtgatactgcatctaaagtcaaccaagta
ttgaagagagcagaggagcaggctcaaatgattgaatcactccatacatccgtagcgatg
tacaagagattatatgaagaggaacataaacttagggcgcttccttcccatttagaagaa
gcagttccagttcaagagcaaggaagtaggggggctatgcttttacttgagagcagcagt
aatgcaactcaaaaggtgcaagagcatacttttgagcgcttgaaaagtcttgaagaagat
gtggcaaaatctaggggtgaaataatttccatgcgagctgagcgggacaagtatgcactg
gaagcacaatttgcccaagaaaaacttgatagatttatgaaggaattcgagcatcagaga
caagagcataatggagttcttgctagaaatgtggagttctcgcagttgatagttgactac
caaagaaaactgcgtgaaagtgctgaggctgtagatgcatccaatgaactttccaggaag
ctgaaaatggaggtatcaatgttgcagcacgaaaaggaaatactacaaaactctgagaag
agagcttctgatgaagttcagagtttatctgagagggttcatcggctgcaggcaagtttg
gataccattcacagtactgaggaagttcgtgaggaggctagaggtattgagaagagaaag
caagaggagtatatcagcaaaattgagagagaatgggccgatgctaaaagggagcttcag
gaagagcgagatactgttcgcaatctcactcttgatcgagaaagtacgctgaagaacgcc
ttgagacaagttgaggaattaagcaaagacttggctaatgccatgcaatctgttacagct
gctgagtctagggctgccgttgcagaggcacgctgctctgatctggaaaagattatagag
tctgccactacgaaggattctgatggtaaggaaggtgcggcatcctctgcttctagtgat
aagttactggcaaattaccgggaggaaattgaaaaattaagaagggaagtacaatctagc
agtgaacacatgctgcagtataagagcattgctcaagtaaatgaagaagcactgaaacag
attgaagtggcatatcagaattttaaaaatgagactgatgaagcaaagaggtcattggaa
gctgagcttcattcacttaaagagcgcatatgtgaacttgaaagtgaatgtcaacagaag
actgcagaagcaatctctgcaaatgctggaaaagacgaagctcttatgggtgctttgtca
gaaatatctaatctgaaggatgattgtgctaacaaaaaatcagagattgtggtgttggaa
tcgcgcatctctgccctgaaagaagatttggagagagagcatcaacgatggcgaaatgct
caagataactacgaaagacaggttatccttcaatcagacacaattcaggagttaacaaaa
acatcacaagctttagctgcagcacaagaggaggttgctaagctccggaaagtggcagat
acacttaaaagtgaaaataatgagttgaagtcacgatgggagatggaaaagttagccata
gaagcttataagaatgatgcagataggaagtacgatgaaataaatgaactgaacaaaatt
ttgcacagccgacttgaggccctgcatattcaggcggctgaaaaggaacgaggaacggct
tcgagttctcagaacttagctgatgatgatgggctgcagagtattgttagttatctaagg
cggtcaaaggagatagcagaaactgagatctctttgctgaagcaagaaaagattcgcttg
cagtctcaactcgagattgctctgaagtcatccgaggaagcacaagcaacacttcgcatg
gagcgagcaaagtcacgctcatcagtcttctctgaggaagaattcaaatctcttcaacta
caggttagagaagtgactttactccgcgaaagtaatgtgcaactcagggaggagaaccgg
cataattttgaagaatgccagaagcttcgtgaagctttccaaagtgctaagattcagaat
gataatatggagaatctattgagggacaaagacactgaattggaagcttacagaaaagaa
attgatatgctgaagctggagaaagcgcaactcgaaaacagaatcgatgaattagttcag
aagtgcaaggatgtcgatgtggatgattataatcgcatgaaagaatctcttcagcagatg
gatgcaagtttaaaagaaaaggatgcacaattggaggaaattaagaaacatctatccgaa
aagcaggatgctatatcactcttagagaaagatctcgacagaacccgtactgaattgagc
aaaaaggagacgaggattaatgacatcttgcaagctgatgcttctctaaaatctgaagtt
gaaaaacttaaacggatgaatattgcatcgaggaggaagtatgataacttgttaaaggaa
aaggatgatctgaacaaagaggtgcaatccctttcgaaacagttagaggaagctaaacaa
gccaagcaaaatacggtcgattctgcagccgagcaggctctaaaggaaaaggagaaggag
aaagacaccagaatccaaatcctggaaaaaacactggagaggcacagagaggacttgaag
aaggagaaggaagatcttcataaggaaaaagaaaaaaatcagaagatgcggaaaactctg
attgattctcgtacaattgtaactcaggaaaaaaccatgctctcagatgagttgtcgaaa
cataaacaagctctgaaagaacttcaggatgaggtggagaaattgaaaagctcgggtcag
ccagagagtacatctgtgatccaacattcttctgttgctctattggaagattttgcttcg
acatattatcaggctgttgagaattttgagcaggtttcacagtctgcttgtgttgatccc
gattctgccgcccttgacgctcctccagataatacatcatctgctggtcagattgtcagt
ttagcgaaccaaaccccgccagttcctgctgcaactgctccgttagcaagaacaagtgac
gacaaaaataggagacttgctactgcaaaggctagtgctaaaattggaagacgactggtg
cgcccgagtattacaaggcccaaggagccgcaaggcgaggtagatatgtcggaagcagac
gaatccaataccgggttatcatcccaaaatgcagaaagtcaaggacatacagctactgtt
ccagctccagctgcttccatacgcaaacgtccttcgacttcactgtcttctgaaatgcaa
gaggatttgcctgcgccggaggaaacaagccccgactcagccgctcctcttcacaagaag
cccaaaggctcagaaagtctacaagagggcggagaagaacccggaactgctcctggaaaa
ctttccgaagttttagctgttgaggaaccatctgatgctgcattatctaaagacgaaaca
gttgatgttgaaagggaggattttgatgctacagttgagcaaggagaagacccggcaaca
gatgaacagatgcaggttgaactacctagcgaaacagtcgagactgctgaagaaaaactc
gacaagccaagcgaaactgtgatgtccgacgaccagttgagagatcagacagaacaagac
atccagcagataatttccgaatcaagcggcgacagagaagagggtgagatggtcgccgag
tacggcgataatgatgacaataatgtagctaacgagatgtccggcctaggctccgacgag
cttcaggctgctccacaaacaggcgaaccggagaacacacaaattactgacccgatgagt
caagcaaacttggaatctggggaaatcgatccttcccaaaccccaccatgggaggaagat
aagattgtcgacacgactgagaacattcccgacaatgcaagcaagcttaaagaagcttcg
ccggctcctcctgatcctgcaaccgacattcctgccaccgggtcaactgttactgcaact
gaagaagcctcgaccagcagtgctgtggatgccggctcttccgaacaaggcggctccact
cccccacaggatacgggaacagcgaaaccagtgtcgcctgtgagtggcagttcgactacc
atcaatctgcaggagagagcgaggcaacgggcgcacctgagacaagctgggatggcttct
tctacttcgacaacccccggcagagctcgcggcagaacgattcgcggtcgcggcgcccga
ggcactacccggggaggacgtggacaatcttcagtcgtattttcagggatcgaagatgga
attacagaaagtattgggcagtaa
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integrated database retrieval system