Andrographis paniculata: 127254609
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Entry
127254609 CDS
T08689
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
apan
Andrographis paniculata
Pathway
apan04120
Ubiquitin mediated proteolysis
apan04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127254609
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127254609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apan04121
]
127254609
Enzymes [BR:
apan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127254609
Ubiquitin system [BR:
apan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127254609
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127254609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
EIF3I
zf-C3HC4_2
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
zf-C3HC4
WD40_like
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_RFWD3
zf-C3HC4_3
Beta-prop_WDR35_TULP_N
zf-RING_2
Beta-prop_WDR75_1st
zf-C3HC4_4
Beta-prop_SCAP
eIF2A
U-box
Beta-prop_DCAF12
zf-RING_UBOX
Beta-prop_IFT122_2nd
zf-RING_5
DUF1664
Beta-prop_SPT8
YbfN
zf-RING_6
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127254609
NCBI-ProteinID:
XP_051135773
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MGESSTGAVDKAEDRKGVDGAAAAEKELLCPICMQIIKDAFLTACGHSFCYMCIFTHLQN
KSDCPCCSQFLTPSQLFPNFLLDKLLKKTSAHQLSKTATPVEQFRQSLEQGCEVSVKELE
SLLSLVSEKKRKLEQEEAERNMQILLDFLHCLRKQKVNELSEVENDLQYIKEDLNAVEKH
RIELYRARDRCSVKLKMLSDNPVGVRSRASVDRSFSGLACNSCNVQGGLSLNSQNKKDEG
RFQFKPHVTQSKDTSLSGPTSQQLSQSGSAVMRKKRVHAQFNELQEFYLQKRRQLINQRA
NLEKKDKSVITREGYSSGLSDFQSVLSTFTRYSRLRVIAELRHGDLFPSANIVSSIEFDR
DDELFATAGVSRRIKVFDFSSVVNEPTDVHCPVVEMATRSKLSCLSWNKFTKTQIASSDY
EGIVTVWDVTTRQSIMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTNQESSVLN
IDMKANICCVKYNPDSSKFIAVGSADHHIHYYDLRNTCHPLHVFSGHKKAVSYVKFLSNN
ELASASTDSTLRLWDVKENSPVRTYRGHTNEKNFVGLTVNNEFLACGSETNEVFVYHKAI
SKPATWHKFGAPDVEDTEEDAGSYFISAVCWKSESPTMLAANSRGTIKVLVLAA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatcctccacgggggcggtggataaggcggaggaccgcaagggagttgatgga
gcggcggcggcggagaaggaattgctctgcccaatttgtatgcagataatcaaggatgcg
ttcctcacggcctgtggccacagcttctgctacatgtgcattttcactcatcttcagaac
aagagcgactgtccttgctgctcgcagttccttacgccgtcgcagctcttccccaacttc
cttctcgacaagcttttaaagaagacttcagctcatcaactatcaaaaactgctacccct
gtagaacaatttcgtcagtcattggaacagggttgtgaagtgtcagtgaaggagttggaa
tctttattgtctcttgtgtcagagaaaaagagaaaactggagcaggaagaagcagagaga
aacatgcaaattttgctggacttcttacactgcttaaggaagcaaaaagtgaatgagctc
agtgaggtggaaaatgatcttcaatatatcaaggaggacttaaatgctgtagaaaaacat
aggatagagctataccgagcaagagacaggtgttcagttaaactgaagatgctctctgat
aaccctgtgggtgtaagatctcgcgcatctgtagatagaagtttttctggtcttgcttgt
aactcttgcaatgtacaaggaggactttccttgaattcccaaaacaagaaagacgaggga
agattccaatttaaaccccatgtaactcagagcaaagacacttctttgagtgggccaaca
tcgcagcagctaagtcaatctggttcagctgtgatgcggaaaaagcgcgttcatgcacag
tttaatgaacttcaagaattttatttgcaaaagagacgccaattgatcaaccagcgtgcg
aacttagaaaagaaagataagtctgtcattacaagagaaggctacagttccggtctatca
gattttcaatcagttcttagtacattcactcgttacagtcgattacgagtaattgctgaa
ctcagacatggagacctctttccttcagccaatatagtttcgagcatagaatttgatcgg
gatgatgagctctttgcaacagctggagtgtcacggcgcataaaagtttttgatttttct
tcagttgtaaatgaacctacagatgtacactgccctgttgtggagatggcaacacgatct
aaacttagctgcttgagctggaacaagttcaccaaaactcaaatagctagcagtgattat
gagggaatagttactgtttgggatgtgactacaagacagagtatcatggagtacgaagag
catgaaaaacgcgcatggagtgttgatttttctcgaacagagccatcgatgcttgtgtct
ggtagtgatgactgcaaggttaaagtgtggtgcacaaaccaggaatcaagtgtgctcaac
atagatatgaaggcaaatatatgctgtgtgaagtataatcctgattccagcaaatttatc
gcggttggttctgctgatcatcacatccattactatgatttgagaaatacttgccaccca
cttcacgtgttcagtggccataaaaaagcagtttcgtatgtaaaatttctgtccaacaat
gagctggcttctgcatccaccgacagtactctcaggttatgggatgtcaaggaaaacagt
ccagttcgcacttacagaggccacacaaacgagaagaactttgtcggcctcacagtgaat
aacgagttcttggcttgtggcagtgaaacaaacgaagtattcgtctaccacaaggccatc
tcaaaacctgcaacatggcataaatttggggcgccggatgtggaagatacggaagaagat
gcggggtcgtatttcatcagtgcagtgtgttggaaaagcgaaagcccgacgatgttggcg
gcaaatagtagaggtacaataaaagtgctggttcttgctgcttaa
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