Andrographis paniculata: 127255209
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Entry
127255209 CDS
T08689
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127255209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127255209
03009 Ribosome biogenesis [BR:
apan03009
]
127255209
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127255209
Spliceosome [BR:
apan03041
]
Complex A
U1 snRNP components
U1 related factors
127255209
Complex B
127255209
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
Helicases
127255209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF6589
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
127255209
NCBI-ProteinID:
XP_051136599
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MFNDRYDPRQHDAGSYRQRRSDLTGQPPMGVPTHAPGGAEGYERGAPIPYGGPSGHRETE
HSGGRDSGGKGFGKGSGSRDYVDRRSDGRGFGSSRDYDRGGDRGGAREGFGRGRGGGRDG
RGFDGGHGGRPRGDDLDNISLPKPDFRGLIAFKKDFYVESPSVRAMTEQEVSMFRARKEI
TIEGRDVPKPIRMFQEANFPDYCLEVISKLGFVEPTPIQSQGWPMALKGRDLIGIAETGS
GKTLAYLLPAFVHVSAQPRLAHGEGPIVLVLAPTRELAVQIQEEAAKFGSYAHIKSTCIY
GGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQI
RKIISQIRPDRQTLYWSATWPREVESLARQFLQNPYKVTIGSPDLKANQSIQQVIEVITD
MEKYNRLIKLLKDVMDGSKILIFVETKKGCDQVTRQLRMDGWPALSIHGDKSQDERDWVL
AEFKTGRSPVMIATDVAARGLDVKDIKCVVNYDFPSCLEDYVHRIGRTGRAGAKGTAFTF
FTHGNAKYARGLIKILQQARQVVPPQLSALARSGPSSGGSNFRSRGRGGFGNRSSISGSN
AIPIGGRRGY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaccgctacgatcccagacaacacgatgccggctcttatcgtcagcgccgg
agtgatttgacggggcagccgccgatgggggttccgactcatgctcctggtggtgccgaa
ggctacgaacgcggtgctccaattccatatggaggtccttctgggcatcgtgagactgaa
catagcggtggacgggatagtggaggaaaagggtttgggaaaggatcaggtagtagagac
tatgtagatagaagaagtgatgggagaggttttggctccagtagggattatgatcgtggt
ggagataggggtggtgcccgtgagggctttggcagggggcggggtggaggtagagatggt
cgtggctttgatggaggccatggtggtaggccaagaggggatgacttggataatatttct
cttccgaagccagatttcagagggttgattgcctttaagaaagatttttatgtcgagagt
ccgtctgtaagggcaatgactgagcaagaggtctctatgtttcgtgcaaggaaggaaatc
accattgaaggccgtgatgtccctaagccaattaggatgtttcaagaagcaaatttccct
gattactgccttgaagtcatatctaaattgggttttgtggagccgactcctattcaatca
caaggatggcccatggctttaaagggtcgagatctgattggcatagctgagactggttct
ggaaagactttggcatatttgcttcctgcttttgttcatgttagtgctcagccgaggctg
gcacatggtgaagggccaatagttttagtgcttgcacctacaagagagctggctgttcag
attcaagaagaagctgccaaatttggatcatatgcgcacataaaaagtacctgtatatat
ggcggtgctcctaaagggccgcaaattcgcgaccttaaaagaggtgttgaaatcgtcatt
gctacacccggaagattaattgatatgctggaagctcagcatactaacttgagaagagtt
acgtatctcgtgttagatgaggctgatcgcatgcttgatatgggttttgaaccccaaatt
agaaaaattatttctcagatccgacctgataggcaaaccttgtactggagtgctacatgg
ccaagggaggttgaatctttagcaagacaattcctgcaaaatccatacaaggttaccatt
ggatctccagatctgaaagcgaatcaatctatacaacaagttattgaagttattaccgat
atggagaagtataacagattgatcaaattgctgaaggatgtgatggatgggagtaaaatt
ttaatttttgtggagacaaagaaaggatgtgatcaagtcactcgacagttaagaatggat
ggatggccggctttgtccattcatggtgataaaagccaggatgagagggattgggtcctg
gccgagtttaaaactggcaggagtcctgtaatgattgccactgatgtggctgctcgtggc
cttgatgtgaaggacattaaatgtgttgtcaactatgactttccgtcgtgccttgaggat
tatgttcacaggattggccgaactggtcgtgctggagccaaaggaactgctttcacattt
tttacacatggaaatgccaagtatgcaaggggactaattaagatattgcaacaagcacga
caagttgtacctccgcaactttctgctttggctcgatctggtcctagttcggggggaagc
aacttccgatctagaggacgaggtggttttggcaaccgctcttcgatttctggctcgaat
gctattcctattggcggcagaagaggttattga
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