Andrographis paniculata: 127255682
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Entry
127255682 CDS
T08689
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
apan03015
mRNA surveillance pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127255682
09122 Translation
03013 Nucleocytoplasmic transport
127255682
03015 mRNA surveillance pathway
127255682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127255682
03041 Spliceosome [BR:
apan03041
]
127255682
03009 Ribosome biogenesis [BR:
apan03009
]
127255682
03012 Translation factors [BR:
apan03012
]
127255682
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127255682
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127255682
mRNA cycle factors
Stress granule specific factors
127255682
Spliceosome [BR:
apan03041
]
Complex C
Other components
EJC/TREX
127255682
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
90S particles
Helicases
127255682
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
eIF-4
127255682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
127255682
NCBI-ProteinID:
XP_051137307
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAGIQRGGGARRAMEGDEKLVFETSKGVQPIMSFDEMGIKDDLLRGIYNYGFEKPSAIQ
QRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELASQTEKV
ILAIGDYINVHAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKILI
LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTAKMRENNFTVS
SMHGDMPQKERDAIMNEFRSGQTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagggattcagagaggaggtggcgcacggcgagccatggagggggacgagaag
cttgttttcgagacttcaaaaggcgtccagccaatcatgagtttcgacgagatgggaata
aaggacgatctcctcagaggaatctataactatggcttcgagaagccttccgccatccag
cagcgtgccgtgcttccgattatctccggacgtgacgtcatcgctcaggcccagtctggt
acgggcaagacttccatgattgccctaactgtttgccagattgtggataccaagtcttca
gaagtccaagccttgatattgtcaccaacaagggagttggcttcccagacagagaaagta
atactggcaatcggtgactacataaatgtacacgcgcatgcttgcgttggaggcaaaagc
gtcggtgaggacataagaaaactggagcatggagttcatgtggtttctggtactcctgga
cgagtttgtgacatgattaagaggaagacattacgaactagggcaatcaaaatattaatc
ttggatgaatctgatgaaatgttgagcagaggattcaaggaccagatttatgatgtttac
agatatctacctccagaactgcaggttgtcttgatatctgccactcttccaaatgaaata
ttggagatgacaagcaagtttatgactgatcctgttcggatccttgtgaagcgtgatgag
ttgactcttgagggcattaagcagttctttgttgcagtagaaagagaagaatggaagttc
gacactctttgtgatttatatgatacccttacaattacccaggctgtgatcttctgcaat
acgaaacgaaaggttgattggcttactgcaaaaatgcgggagaataacttcaccgtctca
tccatgcatggagatatgcctcaaaaggagcgagatgcaattatgaatgaatttcgatct
ggccagacccgagttcttatcaccacagatgtttgggccagaggattggatgttcagcag
gtttctctagtgatcaattatgatctgcccaacaatcgagagctttacattcatcgcata
gggcgatctggtcggtttggtagaaagggtgttgctatcaatttcgtgaagagcgatgac
atcaaaattctaagagacatcgagcagtactacagtacacagattgacgaaatgccaatg
aacgtcgctgatttgatttaa
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