Andrographis paniculata: 127256209
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Entry
127256209 CDS
T08689
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
apan
Andrographis paniculata
Pathway
apan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127256209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apan03009
]
127256209
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127256209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Utp13
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD_LRWD1
PEP5_VPS11_N
Beta-prop_Vps41
Cytochrom_D1
WD40_like
Beta-prop_WDR75_2nd
Ge1_WD40
Nbas_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127256209
NCBI-ProteinID:
XP_051138037
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MALPLSFKNNYRCSRSLQQFYTGGPYAVSSDGSFLVCACHDSIKIVDSSTAAVKSTIEGD
SEPVTAFILSPDDTLLFSTSHSRQIRVWDLASLSCIRSWKGHEGPVMGMACHPSGGLLAT
AGADHKVQVWDVDGGFCTHHFKGHKGVVTSVIFHPDPSRLLLFSSGDDATVRVWDLTSKK
CVATLEKHQSTVTSMAISEDGWTLITAGRDKVVNLWDLHEYKCEKTIPTYEAVEAVCALN
STSPYASKLALLAQKNGRSISSTSIHFVCVGERGIVRIWNSDGPVLFEQKSSDLTVGAVD
EEIKRGFISALVLPLGQGLLCATADQQFLIYDLEEDSIDGLFLVLKRRLIGFNEEIADMK
FLGEDEQFLAVSTSVEQVRVYDLETMSCSYTLAGHSDVVLCLDTCVSSSGKTLIVTGSKD
NTLRLWDCKNRCCIGVGIGHMGAVGAVAFSKKNRNFFVSGSSDRTLKLWSLDGMSDDVES
VSSLKAKAVVAAHDKDINSLAIAPNDSLVCSGSQDRTACIWRLPDLVSVVVLKGHKRGVW
SVEFSPVDQCVVTASGDKTIKVWAISDGSCLRTFEGHTSSVIRASFITRGTQFVSCGADG
LVKLWTVKTNECVATYDQHEDKIWALAIGKKTEMLATGGSDAVINLWHDSTTVDKEEAFR
KEEEGILRGQELENAVLGADYTRAIQLAFELRRPHKLLELFSELCRKEDGCVQIEKALSP
LGKEELQLLLECMREWNTKPKLCHIAHFVLSCLFSTVPPTEVVEMKGIGEILEALIPYSQ
RHFTRMGRLERSTFLLDYTLTSMSVIEPERNDAEGGSRAAASRSERDAKWPPPRIESSNV
AGGDDELAAAQVSGGGGSGVDREEEGEDTEPGKKKKKKRRKSHKSGNRELKKMKVAAYEA
AAISTS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccactctcattcaagaacaactaccgctgctctcgctctctccagcaattc
tacaccggtggaccttatgcggtttcatccgacggatcattcctagtttgcgcgtgccac
gactccatcaagattgttgattcttctaccgccgccgtcaaatctaccattgagggggat
tccgaaccagtaactgccttcattctgagccctgacgacactttactcttctccaccagc
cacagccgccagattcgagtctgggatctcgcttctctcagctgcatccgttcctggaag
gggcatgaagggccagtgatggggatggcttgccatccgtcgggggggttgttagccaca
gcaggtgctgatcataaagtgcaagtatgggatgtggatggaggtttctgtacgcatcat
ttcaaagggcataaaggagttgtgaccagcgttatttttcatccagacccaagccgtcta
cttcttttctccagtggagatgatgccactgttagggtgtgggatctcacaagcaagaag
tgtgttgcaacgctagaaaaacatcaatcaactgtcacttctatggcgatatctgaagat
ggatggaccttgattactgctggaagagataaggttgtgaacttatgggacctgcatgag
tacaaatgtgaaaagactatacctacatatgaggcagtggaagctgtgtgtgcgctcaat
tcaacatccccttatgcctcaaaactggcactgcttgctcaaaaaaatggtagaagtatc
agttcaacttctatacactttgtatgtgttggtgaacgtgggattgtgcggatatggaac
tcagatggcccagtactttttgagcagaaatcatctgatttgactgttggagcagttgat
gaagagattaaaagaggtttcatctctgctctggtgctgccattaggtcaaggattactc
tgtgcaacagctgaccagcagtttctcatatatgatttggaagaagacagcattgatggt
ttgttcttagtgctaaagagaaggctcattggattcaatgaggagattgcagatatgaag
tttctgggtgaagatgaacaattccttgcagtttctaccagcgttgagcaggtacgagtg
tatgacctagaaacaatgtcatgttcgtatacattggctggtcattctgatgtagttcta
tgccttgatacttgtgtatcaagttctggaaaaacacttattgtcacaggaagcaaagac
aacactcttaggttgtgggattgcaaaaaccgatgctgcattggagttggcataggccac
atgggagctgttggtgctgttgctttctcaaagaaaaaccgaaacttttttgttagtggc
agtagtgatcgtacactgaagttatggagcttagatggtatgtcagatgatgttgaaagt
gtttccagcttgaaagcaaaagcagtagtagcagctcatgacaaagatataaattctctg
gcaattgcacccaatgatagccttgtttgcagtggttcacaggaccggacagcatgcata
tggaggctcccagatctggtatcagtggttgttcttaaaggacataagagaggagtgtgg
tctgtggagttttctcctgtggatcaatgtgtcgtaacagcatctggtgataagaccata
aaagtatgggctatctctgatggctcatgcctacggacattcgaagggcacacatcaagt
gtcattagagcttcatttattactcgaggcactcaatttgtttcatgcggtgctgatggc
ttggtgaagctgtggactgtcaaaactaacgaatgcgtggctacctatgatcagcatgaa
gacaagatatgggcattagctatcgggaagaaaacagaaatgctggcgacgggtggtagt
gatgctgttattaatttgtggcatgactctacaactgtggataaagaggaggcctttcgt
aaagaagaggaaggtatattgagagggcaagagctagagaatgcagtattaggtgccgat
tacactagagctattcaacttgcttttgaacttcgaagacctcacaaactcttagagtta
tttagtgaactctgcaggaaggaagatggctgtgttcagatcgagaaggctctaagtcct
ctgggcaaggaagagcttcagttactcttggaatgcatgagagaatggaacacaaaacct
aagttgtgtcacatagcacactttgtacttagctgcctatttagcaccgtacctcctaca
gaagttgtggagatgaagggcattggggagattcttgaagctcttatcccgtattcacag
aggcattttacgagaatggggcggctggagaggagcacattccttttagactacaccttg
acatcgatgtcagttatcgaacctgaaagaaatgatgcagagggaggttcccgggcggct
gcttctaggtctgaaagagatgcgaaatggccgcccccaagaattgagtcgtctaatgtt
gcaggaggagatgatgagttagcagcagcacaagtcagcggcggcggtggcagtggtgtg
gatagggaagaggaaggtgaggacacggagcctgggaagaagaagaagaagaagaggagg
aaatctcacaagtcgggaaatagagaactcaagaaaatgaaggtggctgcctatgaggca
gcggctatatcgacctcctag
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