Andrographis paniculata: 127256750
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Entry
127256750 CDS
T08689
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127256750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127256750
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127256750
Spliceosome [BR:
apan03041
]
Complex C
Other components
Step II factors
127256750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
127256750
NCBI-ProteinID:
XP_051138869
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAAMTSNKSNTAAEISQPKRQKSDSYIRRQKIEQHRKSLPIATVEKKLLEEVSNNDTLII
VGETGSGKTTQLPQYLFNGGFCRNGGTIGITQPRRVAAVTVAKRVAEECGVTLGQKVGYA
IRFEDMTSSSTRIKYMTDGLLLREALLDQYLSKYSVIIVDEAHERTVHTDVLLGLLKSVQ
KARSQGALETTSNDQTKDHNGLPLVKGYNPTSNLKHGQGKKLPALKLIIMSASLDFAIFS
EFFGGARAVHVQGRQYPVDTLYTYQPETDYLDATMITIFQIHLEDQPGDILVFLTGQEEI
ESMQRLVQERLPKLPESKQNLLVVPIFASLPSEKQMKVFMPAPTGFRKVILATNIAETSV
TIPGIKYVIDPGMVKVRTYDASTGIEPLIIVTTSKAQALQRRGRAGREGPGKCFRLYPEN
DFYKLKDSTTPEIKRCNLANVILQLKALGIDDIVGFEFIEKPDSMAIIKSMEMLFLLGAL
TDESKLSDPVGHQMARLPLDPVYSKALIVASQFNCFQEMLIIVAMLSVESIFYAPRERLE
ESRIALRSFSSQDGDHLTLLNVYRAFDEFSEKAKLISSEEKAAKNLKKWCKDNFINYRSL
KHAQDIHSQIQRNAEQMGLAGTSCGDDMLPLRRCLAASFFLNAALKQPDGTYRALSSGLT
VKIHPSSVLFRMKPECIIFNELVKTNQNYIRNVSVIDYLWLAELAPQFYSLQE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatgacttccaataagtccaacactgcagcggaaatcagtcaacccaagcgg
caaaaatccgatagctacatcaggagacagaaaattgagcagcacaggaaatctttgccc
attgcaacagttgaaaagaaacttcttgaggaggttagcaataatgatacactgattatt
gttggagaaacagggagtgggaagacaacacagctaccgcaatatctattcaatggtggg
ttttgccgaaatggtggaaccattgggataactcaacctcgacgtgttgcggccgtaact
gttgctaaaagggttgccgaggaatgtggagttactctgggacaaaaggttggatatgcc
atccgatttgaagatatgacttccagctcaacaaggattaagtacatgacagacggcttg
ttgttgagggaagcattgttggatcaatatctctccaagtattcagtaattattgtggac
gaggctcatgaaagaactgtacacactgatgtattgcttggcctgttgaagagtgtgcaa
aaagctaggtctcagggtgctcttgaaacaaccagtaacgatcaaacaaaagatcataat
ggcttaccgttggtaaaagggtataatcctaccagcaatttgaagcatggccaaggaaaa
aagttgcctgcattgaagttgattatcatgtctgcaagtctagactttgcaatcttttca
gagttttttggtggtgcaagggctgttcatgtccaggggcgccaatatcctgttgacaca
ttatacacctatcaacctgagaccgattacctagatgcaacaatgattaccatttttcag
attcacctggaggatcaaccgggtgatatacttgtgttcttaactggccaagaagaaata
gaatctatgcagagattagtccaagagcgcctcccaaagttacctgagagtaaacaaaat
cttttagttgttcctatatttgcatctctcccatcagagaaacagatgaaagttttcatg
ccagctccaactggatttcgtaaggtcatattggcaacaaatattgctgagacatctgtg
acaatacctggaatcaagtatgtcattgacccgggaatggttaaagtacgcacatatgat
gcttctactggaattgaacctttgattatagttacaacctcgaaagcacaggcacttcag
aggagagggcgagctggtcgtgaaggacctgggaaatgctttcgtctttatccagagaat
gacttttacaagctgaaagattccacaacaccagaaattaaaagatgcaatcttgcaaat
gttattttgcagctgaaagcgctgggaatcgatgatattgttggttttgagttcattgaa
aaaccagacagtatggctatcatcaagtcaatggaaatgctattcttgttaggtgctcta
acagatgaaagtaaattatcagatccagttggtcaccaaatggcgagacttccattggat
cctgtttattctaaggcgctcattgttgccagtcaatttaattgctttcaagaaatgctg
ataattgtcgcaatgctctcggttgaatccatattctacgcaccacgtgaaaggttggaa
gagtcgcggattgcattgagaagcttctcaagccaagatggagatcatctgaccttacta
aatgtgtaccgtgcctttgatgaattctccgagaaggctaagctcataagcagcgaagag
aaagctgcaaagaatctcaagaaatggtgcaaagacaattttattaattaccgttcccta
aagcacgcccaagatatacacagccaaatacaaaggaatgccgagcaaatgggtttggct
ggaacttcatgtggagacgacatgcttccactccgtagatgcttagctgcttcatttttt
ctcaacgcggcattgaaacagccggatggaacttacagggctttgtcaagtggtctgact
gttaagatccatccttcgtctgtcctgtttcggatgaaaccggagtgcatcattttcaat
gaattagtgaagacaaatcagaattatatccgaaatgtttcagtcatagattacttgtgg
ttagccgagctggcgcctcaattttatagcctgcaggagtga
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