Andrographis paniculata: 127257237
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Entry
127257237 CDS
T08689
Name
(RefSeq) polyadenylate-binding protein 5-like
KO
K13126
polyadenylate-binding protein
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127257237
09123 Folding, sorting and degradation
03018 RNA degradation
127257237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127257237
03041 Spliceosome [BR:
apan03041
]
127257237
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127257237
mRNA cycle factors
Stress granule specific factors
127257237
Spliceosome [BR:
apan03041
]
Complex C
Other components
Complex C specific factors
127257237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_Nup35
RRM_5
SET_assoc
RBD_DGKtheta
Exo_endo_phos_2
DUF5062
Motif
Other DBs
NCBI-GeneID:
127257237
NCBI-ProteinID:
XP_051139579
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MFSQRDPTLRKNGFANLYIKNLDSSIDTKALHETFSTFGNILSCKVELDSDGRSKGYGFV
QFDKEESAENAIKRLNGMLINDKQVYVGKFIRRQERNKEKGLPKFTNVYVKNFSEKTTDE
ELKKMFERFGPITSAIVMKDANGKSRSFGFVNYENNNDAAAAVEYFNGTSLDDKTLYVGR
AEKKAERRAKLKAKFEQERISRFEKLKGANLYLKNLDESVTDEKLKVLFSEFGTITSCKI
MCDANGVSKGAGFVAFSNSEEATKALNLMNGRMIAGKPLYVAVAQRKEERKAWLQAHFAR
LRTSGTISPLPGIPAHQTGSLQFRHQPLYIGQVNPAFGFHQQQLLAGLPPTMSSNFVPFH
LQRQNQPVGQQRSGPRRCGNSQQQQHLHNSNQGSNRHTTNQCNGVNHSLPAQTLMGSVVP
MRLNASAAMEIPIPVPISRSTLASALASASPENQCMMLGEHLYPLVERLKPNHARKVTGM
LLEMDQTEVLHLIESPDALKKKVADAMEVLRLAATVPNTGNQSLL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcaaagagatcctactctaagaaaaaatggatttgcaaatttgtatatcaaa
aacttggattcgtcgatagatactaaggcacttcatgaaactttctctacatttggaaat
atactttcttgcaaagtagaacttgactccgatggaagatccaaaggatatggatttgtt
caatttgataaagaggaatctgcagaaaatgcaattaaaagattgaatggcatgctgata
aatgataagcaagtgtatgttggaaagtttattcgtcgccaggaaaggaataaggagaaa
ggattacccaaatttactaatgtttatgtaaagaatttttctgaaaagacaactgatgag
gaacttaagaaaatgtttgagaggtttggcccaatcactagtgcaattgttatgaaagat
gccaatggaaaatccagatcgttcggatttgtgaattatgaaaacaataacgatgcagca
gctgcagttgagtacttcaatgggacttccttagacgacaagacattatatgttggaagg
gccgagaaaaaagctgagaggagagcaaagttgaaagctaaattcgaacaggagaggatt
agtagatttgagaaattgaaaggtgcaaatttgtatttaaaaaatcttgatgagagtgta
accgacgaaaagttgaaggtgcttttttcagagtttggaaccattacatcatgcaagatt
atgtgtgatgctaatggagtaagcaaaggtgctggttttgtggcattctctaattccgaa
gaagctacaaaagccctgaatttaatgaatgggaggatgatagcaggaaaacctttatac
gtagctgtagctcagcgcaaagaagaaagaaaggcttggcttcaggcacattttgctcga
ttgcgaacctccgggacaatatcaccattgccgggaattcctgcgcaccaaacgggttcg
cttcagtttagacatcaaccactttacataggacaggttaatcctgcatttggattccat
caacagcaactattagccggattgccgcctactatgtcgtcaaattttgtaccattccat
cttcaacgacaaaatcaacccgtaggacaacaacgctccggcccaagaagatgcggcaat
tctcaacaacagcaacatctgcacaactcgaatcaaggttccaatcgacatacaacaaat
caatgcaatggagttaatcattcattacctgcccagactctaatgggatcagtcgtgcct
atgcgtctcaatgcatcggctgccatggaaattccgatcccggtgcctatatcgagatct
acacttgcttcggctttggcctcggcttctcctgagaaccagtgcatgatgctcggcgaa
cacctctacccgctcgtcgaacgcctcaagcccaatcatgcgaggaaagtaactggcatg
ttgttggagatggaccaaactgaagtgcttcacctcattgaatctcctgatgctttgaag
aagaaagttgcggatgctatggaagtgcttcgattggcagcaacagtaccaaacacgggg
aatcagtctttgctgtaa
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