Andrographis paniculata: 127257901
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Entry
127257901 CDS
T08689
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
apan
Andrographis paniculata
Pathway
apan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127257901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apan03009
]
127257901
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
RNases
127257901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RPW8
Motif
Other DBs
NCBI-GeneID:
127257901
NCBI-ProteinID:
XP_051140391
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MDKLIGSAKKEALVEMVKLAQKRGMVGSKGGWKEFLKVYDKKFGASLSDPSRRPVDSLVA
FLKTFEQVDDLKFFKKVLQCHRNRDEVEQLKKTSPKDETAEQRLVRLTLEHPLYPIDYSF
PSHEEEWMVIKHKKKSKSPMSNEMIAIDCEMVLCEDGTEALVKVCAVDRNLEVKLDKVVH
PKKEIADYRTDITGISAKDLDGVTHTLKDVQKSLKKILSHGAILVGHSLSNDLQALKLDY
SRVVDTSYVFKYANGLMYKKPSLSWLCKALLGYELREQGNPHNCLDDACTAMKLVTARLE
GRINDVIDEEVRESDVAKLLVHRIPNNVLSKDLSSILHGEFTIEVKMGKKVRNTYSAFAI
FKDQQEAIKAFDKLEGSLEKDSCGRLQKLVKFELDSGISGTLCVCKIFHEISDQLTKKRP
AEDENTLGISKKLKTDEILKQLEDCQQCEAYLKEIERLQTEINKRDEEISSLNKIVAVLT
RKQGL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggataagttgatcggttctgcgaagaaggaggctttggttgagatggtgaaattggca
caaaagagaggaatggtcgggagtaaaggtggctggaaggagtttttgaaggtttatgac
aagaaatttggggcaagcttgagtgacccttccaggagacctgttgattctttggttgct
tttttaaaaacttttgagcaagtggatgatcttaagtttttcaagaaagtattgcaatgc
catagaaaccgtgatgaggtggagcagcttaagaaaacttctcctaaagatgaaactgct
gaacagagattagtacgcctgactttggagcatcctctgtatccaatcgattattccttt
ccttctcacgaggaggaatggatggttataaaacacaaaaagaagtccaagtctcctatg
tctaatgaaatgatcgccattgattgtgagatggttctctgtgaagatggcacggaagcg
ctggttaaagtttgcgcagtagaccgcaatttagaggttaagctagacaaagttgtacat
ccaaaaaaagaaattgcagattatcggacagatataactggaatctctgcaaaagatttg
gatggagtaactcatacgttgaaagatgtacagaaatctctaaagaaaatattatcacat
ggtgccattctagttgggcacagtcttagtaatgaccttcaagcgctgaaattagattac
tcgagagtggtcgatacatcctatgtcttcaagtatgccaatggacttatgtacaagaag
ccatctctgagttggctgtgtaaggctttgttaggttatgaactccgggagcaggggaat
cctcataactgtctagacgatgcatgtactgcaatgaagcttgtcactgcaaggttagaa
ggaagaatcaatgatgtcatagatgaggaggtgagggaatccgacgtggcaaagctgctc
gtacacagaatccccaacaatgttcttagcaaagatttgagtagcattcttcacggggaa
ttcacaatcgaagtcaagatgggtaaaaaggtcagaaatacatattcggcctttgcaatc
ttcaaagatcagcaagaagcaattaaagcattcgataagcttgaaggttctctagaaaag
gactcatgtgggcgattgcaaaagcttgtgaaatttgagcttgattcaggaatatctggc
actttatgtgtgtgtaagatttttcacgagatctccgaccaactgacaaagaagaggcca
gctgaagatgaaaacactcttggcatatcgaagaagttgaaaacagatgaaatattaaaa
cagctcgaggattgccaacagtgcgaggcgtatttgaaagagattgaaagactgcagaca
gaaataaacaaaagagatgaggaaatttcgagcttaaataaaatagtcgctgtacttact
aggaaacaagggctctga
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