Andrographis paniculata: 127258220
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Entry
127258220 CDS
T08689
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
apan03015
mRNA surveillance pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127258220
09122 Translation
03013 Nucleocytoplasmic transport
127258220
03015 mRNA surveillance pathway
127258220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127258220
03041 Spliceosome [BR:
apan03041
]
127258220
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
127258220
Spliceosome [BR:
apan03041
]
Common components
Common spliceosomal components
Cap binding complex
127258220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
SKA2
Motif
Other DBs
NCBI-GeneID:
127258220
NCBI-ProteinID:
XP_051140946
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MSSWRSLVLRLGEKCSEYGGNADYKDQLETCFGVVRRELGHDSDEISSFLLECAEQLPHK
IPLYGTLIGLLNLEDEDFVRKIVEITHDNLQVALDKGKCNTIRILLRFLTALMCSKVLQP
NSLVVLFETLLSSAATAVDEDKGNPSWQACADYYIVCVLSCLPWGGAELVEQVPEEIDRV
MVGIQAYMSIRKHVSDSGCSVFENVYESDQGEAGKDFLEDLWSRVQDLSSKAWKLDSVPR
PHLPFEPQLVGGKSHDFGPINCPDLPDPPAPSSEVARGKQRHEAEQKYPQRIRRLNIFPS
SKTEHLQPIDRFVVEEYLLDVLFFLNGCRKECASYMVGLPVPFRYEYLMAETIFSQILLL
PQSPFKLMYYTLVIMDLCKALPGAFPAVVAGAVRSLFDKISDLDMECRSRLILWFSHHLS
NFQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIDSAPALEELLPPR
GTPNFKYSAEDCDQTEREISSKLNQMVKDRSASREIISWIEEHVLPEHGFDVTLRVVAQT
FLNIGSKSFTHLITVLERYGQVFAKICPDQDRQIMLISEVDSLWKNNAQMAAITIDRMMG
YRLVSNVAIVKWVFSTSNSDQFHVSDRPWEILKNAVTKTFNRLTDLRKEILSLKTSAALA
TEAAVKAQAELEDAQSKLTLTLVDGEPVLAENPVKMKRLKSSAERTKEAETSARESLEAK
QAVFSQVINEIEELFLFLYKSFCNVLAEPLRETDGSLHQSSKAADEMVVDQEDAPTMELD
KEGEKSEKSQPNGDRTTNGYNVGEKEQWCLTTLGYVKAFSRQYASVIWPLVERLNAEILT
EDVHPLFRKAVYTGLGQPIDTYAQIDVEKEKDCFRRFILKNHQNMLHPNIY
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctggaggagtctggtgcttcgtctcggagaaaaatgctccgagtacggcgga
aatgctgactacaaggaccaattggagacttgctttggtgtggttcgtcgagaattgggg
catgacagtgatgaaatctcttctttccttcttgaatgtgctgaacagttgcctcataaa
attcctttgtatggaacactgattggcttattaaatctggaagatgaagattttgtcagg
aaaattgttgaaattacacatgataatttgcaggttgctttagataaaggaaaatgtaat
acaatccgcatacttctgcgtttccttactgcattgatgtgcagcaaagttctccaacca
aattccttggtagttttgtttgaaacactcttatcatcagctgcaaccgcagtggatgaa
gataagggaaatccatcctggcaagcttgtgctgactattatattgtatgtgttttatca
tgcctcccttggggaggagcagaacttgttgagcaagttcctgaggagattgatagggtt
atggtgggaattcaagcctacatgagtattagaaaacatgtttctgattctggctgctct
gtgtttgagaatgtttatgaaagtgatcaaggtgaagctggaaaggatttcttggaggat
ctctggagcagggttcaagatctttccagcaaggcatggaaactggatagtgttcccaga
ccacaccttccatttgaaccacagttggttggtggaaagtctcatgattttggtcccata
aactgccctgaccttcctgatcctcctgcaccatcatcggaagttgcacgtggtaaacaa
aggcatgaagctgaacagaaatatcctcagcgtatcagaagacttaatattttcccttcg
agtaagaccgagcatttgcagccaatagatcggttcgttgtggaagagtatttgctggac
gtgctatttttcttaaatggatgccggaaggaatgtgcctcttatatggttggcttgcca
gttccatttcgatacgagtaccttatggctgagaccatattttctcagattctcttacta
ccccaatctcctttcaagctgatgtattacacattagtgattatggatctctgcaaggct
cttcctggtgcctttccagcagttgtagctggtgcagttcgttcactgtttgataagatt
agtgatttagacatggagtgccgttctcgtcttatcctttggttctcacatcatctatca
aactttcaattcatttggccatgggaagaatgggctcatgtcttagatcttccaaaatgg
gcaccacaacgtgtgtttgttcaggaggttctggaaagggaagtgcggttatcatattgg
gacaaagttaaacagagcattgacagtgcccctgctttagaagagttgcttccaccaaga
ggcactccaaatttcaaatacagtgcagaagattgcgatcaaaccgagcgtgaaatttcc
tcaaaacttaatcaaatggtcaaagaccgctcagcttctcgtgaaattatttcgtggatt
gaagaacatgtgctaccagaacacggatttgatgttacactcagagtggttgctcaaacc
ttcctgaatattggttctaagagctttactcatttgattactgtgttggagaggtatggt
caagtctttgctaaaatctgtccagatcaggacaggcaaatcatgttgatttctgaagtt
gattctctctggaagaacaatgctcaaatggctgcgataactatcgatagaatgatgggc
tatcgcctcgtgtctaatgtggctatagtgaaatgggttttctcaacatcaaattctgat
cagtttcatgtttctgatcgcccatgggagatactgaaaaatgctgttactaagacattc
aatcgcttgactgatctaagaaaggagattttgtccctcaagacgagtgctgctttagct
acagaagctgcagtgaaagcccaagctgagctggaggatgcacagtcaaagctaactcta
actcttgtagatggtgaacctgtccttgctgaaaaccctgttaaaatgaagcgcttgaag
tcaagtgctgagagaacgaaagaggcggaaacttctgcacgtgaatcattagaagccaaa
caggcagttttttcacaagttattaatgagattgaggaattatttctattcttgtacaaa
agcttctgtaatgtgttggctgaaccgcttcgagaaacagatggatccttgcaccaatct
agcaaggcagcagatgagatggttgttgaccaggaagatgctccaacaatggagttggac
aaagagggtgaaaaatccgagaaaagtcaacccaacggggacaggaccacaaatggttat
aatgttggtgaaaaggaacagtggtgtttaaccaccctgggttatgtcaaggccttttca
cgtcaatatgcttcagtgatatggcctctagttgagagattaaatgcggagatattaaca
gaggatgttcatccactttttaggaaagctgtatacactggcctgggccaacccattgac
acttatgctcaaattgatgtagaaaaggaaaaggattgctttcgaaggttcattttaaag
aatcatcagaatatgttgcatccaaatatttattga
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