Andrographis paniculata: 127258899
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Entry
127258899 CDS
T08689
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127258899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127258899
03009 Ribosome biogenesis [BR:
apan03009
]
127258899
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127258899
Spliceosome [BR:
apan03041
]
Complex A
U2 snRNP components
U2 related factors
127258899
Complex B
127258899
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127258899
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
90S particles
Helicases
127258899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
ABC_tran
T2SSE
SRP54
AAA_30
SLFN-g3_helicase
AAA_7
Flavi_DEAD
AAA_33
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
127258899
NCBI-ProteinID:
XP_051141918
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MGTERKRKVSLFDVVDDSAVSGKMARANGGASTPTAAVASTINKWNGRPYSQRYYEILEK
RKSLPVWQQKEEFLQVLRANQTLILVGETGSGKTTQIPQFVLDAVEIESSDKRKKFMVGC
TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSTKTVLKYLTDGMLLREAMTDPL
LDRYKVIILDEAHERTLATDVLFGLLKEVLRNRHDLKLVVMSATLEAEKFQSYFNGAPLM
KVPGRLHPVEIFYTQEPERDYLEAAIKTVYQIHACEPHGDILVFLTGEEEIEDACKKLAK
EIANAGDQVGPAKIVPLYSTLPPAMQQKIFEPAPPPAVEGGPPGRKIVVSTNIAETSLTI
DGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSF
HNDLSPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD
DEGNLTKLGEIMSEFPLDPQMGKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAA
DEAKARFGHIDGDHLTLLNVYHAYKQNNEDPQWCYENFVNHRALKSADNVRQQLTRIMAR
FNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQAVHLHPSNCLDHK
PEWVIYNEYVLTSRNFIRTVTDVRGEWLVDIAPHYYDLSNFPNCEAKRQLERLYKKREES
KNRK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggaacggagagaaagaggaaggttagtctgttcgatgtagtggacgactcggccgtc
tcggggaagatggctcgggccaacgggggcgcctcaacccccaccgccgcggtggcatcc
acgattaacaagtggaatggaaggccttactcccagaggtattacgaaatcttggagaag
agaaagtctctccccgtgtggcaacagaaagaggaatttttgcaggtgctccgagccaat
cagaccctaattcttgttggtgaaactggtagtggaaaaacaacgcagattccccagttt
gtgctagatgctgtagagatagagagttcagataaacgcaaaaagtttatggttggatgc
actcaaccccgaagagtggctgcaatgtctgtttcaaggagagtggccgaagagatggat
gtgacaattggagaagaagttggttacagcattcgatttgaggattgcagcagtacaaaa
acagttttaaagtatttgacagatggtatgcttttgagggaagccatgacagatccgctt
ttggacagatacaaagtgataattctcgatgaggctcatgaaagaactttggctacagat
gtactctttggacttttgaaggaagtgctgaggaatagacatgacttgaaactagttgtc
atgagtgccactctggaggctgaaaaatttcaaagctatttcaatggtgcaccgctaatg
aaagttcctgggcggcttcatcctgtcgagattttctatacacaggagcctgaaagggac
tatcttgaagctgctataaagacggtgtatcagatacatgcttgtgaacctcatggtgat
atcctagttttccttacaggtgaggaggaaattgaagatgcctgtaagaagttagcaaag
gaaatagctaatgctggggatcaagttggaccagcaaaaatagtacccttatactcaaca
cttcctccagcgatgcagcagaagatttttgaacctgctccaccccctgcagtggaaggt
ggtcctccaggaaggaagattgttgtttcaacaaatattgctgaaacatcattgactatt
gatggcattgtttatgttatagatcctggatttgcaaaacaaaaggtttataatcctcga
attcgggttgaatctttgttggtttctcccatatcgaaggctagtgcccaccaacgagca
ggacgtgctggaagaacacaacctggaaaatgttttagactatacacagagaagagtttt
cacaatgacctatcaccacaaacctatccggagatattgcggtcaaatcttgcaaacact
gttctgactctgaaaaagctgggtatagatgatctggtgcacttcgattttatggatccg
cctgctccagagacactgatgagagcactggaggttttaaattacttgggagcattggat
gatgaagggaacttaaccaagttgggtgaaatcatgagtgagtttccattggatcctcag
atggggaaaatgctggttgttagcccagagtttaattgctcaaatgagattctttctata
tcagcaatgctttcagtacccaattgctttgtccggcctagggaggctcaaaaagctgca
gatgaagccaaagctcggtttgggcacattgatggagatcacctcacactgttaaatgtc
taccatgcgtacaaacaaaataatgaagacccgcagtggtgctatgagaattttgtcaat
catagggcgctgaaatcagctgataatgttagacagcagctaacccgcattatggcccga
ttcaacttgaagctgtgcagcacagacttcaatagccgtgattactatgtgaacatccgg
aaggctatgctggctggatactttatgcaggttgcccatttggagcgaactggacactat
ttaaccgtcaaagataaccaagcggttcacttacacccttcaaactgcctggaccataaa
ccggagtgggttatctataatgaatatgtcctgacaagcagaaattttattcgcacagta
acagatgttcgcggggaatggttggtggacattgcacctcattactacgatctgtcgaac
ttccccaactgtgaggcaaaacggcagctggagagactgtacaagaagcgggaggagagc
aagaataggaagtga
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integrated database retrieval system
