Andrographis paniculata: 127259538
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Entry
127259538 CDS
T08689
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127259538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127259538
03009 Ribosome biogenesis [BR:
apan03009
]
127259538
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127259538
Spliceosome [BR:
apan03041
]
Complex A
U1 snRNP components
U1 related factors
127259538
Complex B
127259538
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
Helicases
127259538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
127259538
NCBI-ProteinID:
XP_051142874
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSYVPPHLRNSSSAAAAVVSNGVSDHLDSRHLNNSSHAKPAYAKNSSTCSSIGYGNTVSR
SSGNYAFNRPVAVPDPVFPDWKPSDRVLRFKPEQVQEVRLRLNVDVTVTPDSPPAPAPIE
AFADMNLDQRIMENIAFHDYTTPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ
HCLSQPPIQRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDPFKTAIVVGGTNISEQRSE
LRAGVHIVVATPGRFIDHLQQGNTSLLRISFVVLDEADRMLDMGFEPQIREVMRNLPQKH
QTLLFSATMPVEIEELAQEYLTNPVRVRVGKVSSPTANVSQNLEKVPENEKIDRLLDMLV
EAAAQSEKCGQPFPLTIVFVERKNRCDEVAEALTDQGLKAAALHGGRSQSEREAALRDFR
HGPTRILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSSGQATSFYTDR
DVYLVAQIKKAIQDVGSGNAVTYAMGKTARRKEREAMAAQKEAKVEFSKLSLLGNNEITV
EDKYRHMISSAASKKEGAADDAWDD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgttcctccacacctcagaaattcttcctccgccgccgctgcagttgtctcc
aatggcgtctctgatcacctcgactcgagacacctcaataatagctcgcatgctaaaccc
gcctatgctaagaatagcagcacctgttcctctattggctacgggaatacggttagccgg
agctccgggaattacgccttcaatcgaccggttgcagtccccgaccccgttttccccgat
tggaaaccgtccgatcgcgttctcaggttcaaaccggaacaggttcaagaggttcgtttg
cggctgaatgttgatgttactgttactccagattctcctcctgcgcctgctcccatcgaa
gcatttgctgacatgaatttggaccagagaatcatggaaaacattgctttccatgattat
accactccaacatctatccaggcccaggccatgcctgttgctcttagcggaagggatctt
ttgggatgtgcagaaactggtagtggtaaaacagcagcatttaccatacctatgatacag
cattgcctttctcaaccaccaattcaacgtggagatggacccttggcgctagtgttagct
ccaacaagagagcttgctcaacagatagagaaagaagtcaaggcttttagtagatctttg
gacccgttcaaaactgctatagttgtgggtggtaccaacatttctgagcagaggtctgag
ttgcgagctggggtgcatattgtggttgcaactcctgggagatttattgatcatttacaa
caaggaaacacgtcactgctgagaatttcatttgttgttttggatgaggctgataggatg
cttgacatgggatttgaacctcagataagagaggtgatgcgaaatcttcctcaaaagcat
caaactctgcttttcagtgctacaatgcctgtggaaattgaagagctagctcaggaatac
ttgacgaaccctgtgcgggtaagggtgggtaaagttagcagtcccacagctaatgtctct
caaaatttggagaaagtgcctgaaaatgagaagattgacaggcttcttgatatgctagtt
gaggcagctgctcagtcagagaagtgtggccaaccttttccactgaccattgtatttgtg
gaacgaaagaatagatgtgatgaagtggcagaagcactaactgatcaaggtctgaaggca
gctgctcttcatggtggtcgaagtcaaagtgaaagagaggctgcgctccgcgattttagg
catggtcctaccagaatacttgttgcaactgatgttgcatcccgaggattagatgtcacc
ggggttgctcatgttatcaacctagaccttccaaagacgatggaagattacgtgcacaga
attggaagaactgggcgtgcaggatcgtctggacaagcaacatctttctatacagatcgg
gatgtgtaccttgttgcccagataaagaaagcaattcaagatgtaggctctggtaatgcc
gtaacttatgcaatgggaaagactgctcggaggaaggagagagaagctatggcagctcag
aaagaagcaaaagtggaattctccaagctatctttgctcggaaacaatgaaataaccgtg
gaagacaagtacaggcacatgatttcttctgcagcaagcaaaaaagagggcgcagccgat
gatgcttgggacgactga
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