Andrographis paniculata: 127259877
Help
Entry
127259877 CDS
T08689
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
apan03015
mRNA surveillance pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127259877
09122 Translation
03013 Nucleocytoplasmic transport
127259877
03015 mRNA surveillance pathway
127259877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127259877
03041 Spliceosome [BR:
apan03041
]
127259877
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127259877
TREX complex
127259877
Spliceosome [BR:
apan03041
]
Complex C
Other components
EJC/TREX
127259877
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127259877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
C19orf84
RRM_11
RRM_10
RRM_3
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
127259877
NCBI-ProteinID:
XP_051143444
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MSGAPLDMTLDDLIKINKKPAGNRGRGGRPNGPGPARRQPIRSANRLAPYAAPKAPESNW
GHDMFSGGGAASSIETGTKLYISNLDYGVSNEDIKELFAEVGDMKRYGIHYDRSGRSKGT
AEIVFARRQDALNAVKKYNNVQLDGKPMKIELVGTNISTPAVALPPVGAFVDPYLAPPRS
TQGRGGFGRPRGRGRGFGRGRGQQQQQGRGRGEKLSAEDLDADLEKYHADAVQSN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgctcctctagatatgacgctcgacgatctaatcaagatcaacaaaaagccc
gccggaaatcgaggcagaggaggccgacccaacgggcccggcccggctcgacgacagccg
atccggtctgccaatcgtctcgctccctacgcagcccccaaggcgcctgaatcgaattgg
ggccatgacatgttctccggaggcggggcagcttcgagtattgagactggaaccaagttg
tacatatctaatttggattatggtgtctcgaatgaggatattaaggaactgtttgcagag
gttggtgacatgaaacgatatggtatacattatgatagaagtggccgatcgaagggtaca
gctgaaattgtcttcgcacgaagacaagatgcattgaatgctgtcaagaagtataataat
gttcagcttgatgggaaaccaatgaagattgaacttgttgggacaaacatttccacaccg
gccgttgcccttccacccgttggtgcttttgttgatccatatctagctccacctaggagc
acacaagggaggggtggtttcggaagaccgcgtgggcgagggcgtggattcggaaggggg
cgtggacagcagcagcagcagggaagaggtcgtggtgagaagctatctgcagaggatctt
gatgctgatttggagaagtaccacgcagatgcagtgcagagtaactga
DBGET
integrated database retrieval system