KEGG   Andrographis paniculata: 127260013
Entry
127260013         CDS       T08689                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
apan  Andrographis paniculata
Pathway
apan03082  ATP-dependent chromatin remodeling
apan03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:apan00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127260013
   03083 Polycomb repressive complex
    127260013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:apan03036]
    127260013
Enzymes [BR:apan01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127260013
Chromosome and associated proteins [BR:apan03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127260013
   HDAC complexes
    Sin3A-HDAC complex
     127260013
    BRAF-HDAC complex
     127260013
    REST complex
     127260013
    SHIP complex
     127260013
    MiDAC complex
     127260013
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127260013
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127260013
  Chromatin remodeling factors
   NuRD complex
    127260013
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127260013
NCBI-ProteinID: XP_051143601
LinkDB
Position
Unknown
AA seq 431 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYDLHNKMEIYRPHKAYPVEL
AQFHSPDYVEFLQRITPNTQKLFATQMAKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEREGKNYAINVPLKDGIDDASFLRLFKT
IIMKVVECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGVLLDAELPNEIPENDYIKYFAPDFSLKCPSGLMENLNSKSYINTIR
QQVCENLSSIQHAPGVQMQEVPPDFYIPDFDDDEQNPDERVTRQVQDKQIQRDDEYYDND
NDHDNNAMDES
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgcgcagcaaggacagaatctcgtatttctacgacggggatgtggggaatgtatatttc
ggaccaaatcaccctatgaaacctcaccgattgtgtatgactcaccatttggttctcgcg
tatgatctccacaacaagatggaaatttacaggcctcacaaagcatatccagtggagtta
gcacagttccattccccagattatgttgagtttctgcagcgcatcactcccaacacgcag
aagttattcgccactcagatggcaaaatataatcttggagaagattgtccagtctttgac
aatctttttgagttctgccaaatatatgctggtggtacgatagatgctgcacggagattg
aataatcggctctgtgacattgccatcaattgggctggtggtttgcatcatgccaagaag
tgtgaggcatctggattttgttacatcaatgacctagttttgggaattttggagcttttg
aagtatcatgctcgtgtcctgtatattgatattgatgtgcatcatggtgatggggttgaa
gaagccttttatttcactgatagggtaatgacggttagttttcacaagtacggggatttg
ttctttcctggaacaggtgacgtaaaggatgtgggtgaaagagaaggcaaaaattatgcc
attaatgtccctctgaaagatggtatagatgatgccagctttctacgtctctttaaaacg
attattatgaaagttgtggagtgctatgcaccgggagctattgtcctccagtgtggagca
gattcacttgctggggaccgtttgggatgctttaatctttccattgatgggcatgctgct
tgtgtcaagtttgtcaagcaactcaatttgcctttgctggtaactggaggtggtggatac
actaaagagaatgttgccaggtgttggactgtagagacaggagtccttttggatgcggag
ctccctaatgagatcccggaaaacgattacatcaaatatttcgctccagatttctccttg
aaatgtcctagcggacttatggagaatttaaatagtaagtcgtacattaacacaatcaga
cagcaagtatgcgaaaatcttagttccattcaacatgcacctggtgtacaaatgcaagag
gttccaccagatttttatatacctgattttgacgacgatgagcagaatcctgacgaacgg
gtaacccgacaagtgcaagacaagcaaatccagcgggacgatgaatattatgataatgac
aacgatcatgataataatgctatggatgaatcctag

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