Andrographis paniculata: 127263006
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Entry
127263006 CDS
T08689
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127263006
03041 Spliceosome [BR:
apan03041
]
127263006
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127263006
Spliceosome [BR:
apan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127263006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_PARP14_3
RRM_7
RRM_occluded
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
127263006
NCBI-ProteinID:
XP_051147872
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MQNQRMKQQQHQALMQQALLQQQSLYHHPGILAAPQIEAIPSGNIPPGFDPTTCRIVYVG
NIHTQVTEALLQEVFASTGPVEACKLIRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQ
PIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDNMLYACFSVFPSCSDARVMWDQKTGRS
RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGTSDDKQSSDSKSVVELTNS
SSEDVKEAASSDAPENNPQYTTVYVGNLAPEVTQVDLHRHFHALGAGSIEEVRIQRDKGF
GFVRYSTHQEAAMAISLGNAQSFLCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGISA
VDILAYERQLAMSKTAGVHPLMHPQGQHALKGMPPTASQAIYDGGFQQQLMYYQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcagaggatgaagcagcagcagcaccaggcgttgatgcaacaagctctgctt
cagcagcaatcgctttatcatcaccccgggatattagctgctccgcagattgaggcaatt
ccaagtggaaatatccctcctgggtttgatccaactacatgccgcattgtgtatgttggg
aacattcacacacaggtcactgaagcacttctgcaagaagtttttgctagtactggacct
gtggaggcctgtaagctcattagaaaagaaaagtcctcctatggctttattcattatttt
gaccgcagatcagctgcacttgctatattaacgctcaatggaaggcatctgtttggtcag
cccatcaaagttaactgggcatatgcaagtgggcagagagaggatacatcaagccacttc
aacatttttgttggtgatctgagcccggaggttactgataacatgttgtatgcttgcttt
tctgttttccctagttgttctgatgcaagggttatgtgggatcagaaaactgggcgttcc
aggggttttggattcgtctctttccggaatcagcaggatgcacaaagtgcaataaatgat
ttgactggaaaatggcttggcagtagacagatacgttgcaactgggccacaaaaggtgct
ggaaccagtgatgacaagcagagttcagattctaaaagcgttgtagaacttacaaatagc
tcttcagaagatgttaaagaggcagcaagtagtgatgctcctgaaaataaccctcagtat
accactgtgtatgttggcaaccttgctccagaggtgacccaggttgatctccatcgccac
ttccatgcactgggtgctggatcaattgaggaagttaggatccagcgagataagggattt
ggttttgttcgatacagcacccatcaagaggcagctatggctatttcgttgggaaatgct
cagtcattcctctgcggaaaacaaattaagtgctcgtggggaagcaagccaactccaccc
ggaacagcctcaaacccccttcctccacctgctcctgccaccttgccaggaatctctgca
gttgacattttagcatacgagcgacaactggcgatgagtaagacggccggggttcatcct
ctcatgcatccacagggacagcatgctctgaagggaatgcctcctactgctagccaagca
atatacgatggcggtttccagcagcagcttatgtactaccagtag
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