Andrographis paniculata: 127263039
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Entry
127263039 CDS
T08689
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
apan
Andrographis paniculata
Pathway
apan03030
DNA replication
apan03420
Nucleotide excision repair
apan03430
Mismatch repair
apan03440
Homologous recombination
apan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127263039
03420 Nucleotide excision repair
127263039
03430 Mismatch repair
127263039
03440 Homologous recombination
127263039
03460 Fanconi anemia pathway
127263039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apan03000
]
127263039
03032 DNA replication proteins [BR:
apan03032
]
127263039
03400 DNA repair and recombination proteins [BR:
apan03400
]
127263039
Transcription factors [BR:
apan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127263039
DNA replication proteins [BR:
apan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127263039
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127263039
MMR (mismatch excision repair)
127263039
DSBR (double strand breaks repair)
HR (homologous recombination)
127263039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
SH3_Rv0428c
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
127263039
NCBI-ProteinID:
XP_051147920
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MAAAVTPDAVSTILANPCPDSSSELPEIIVQVVDLKLAGSKYMFVANDGKNKVKTLLQSS
LSSLVNSGEIQNLGLIRVIDYTLNDIPTKNEKFLIITKCEAVLPALDSEYRGEVEVGSGI
TLKPKQESMVKMEKKVNVSDSCMKPKKQEVGVKSAAEIVYEQHGNTAPAARMAMTRRIHS
LLSLNPYQGYWTIKVRVTNKGNMRSYRNSRGEGFVFNVELTDEDGTQIQATMFNEAARKF
FDKFQMGKVYYISKGSLKVANKQFKTVQNDYEMTLNENSQVEEASDESTFIPETKFNFVP
IDELSPYVNGRELVDVIGVLQNVSPTMSIRRKSNNESIPKRDITIADETKKTVVVSLWND
LATNVGQELLTMADKSPIVAIKSVKVGDFQGVSLSALSKSLVVINPETPEAKKLRSWFDS
EGKDTCLDAAGAGLSPALKGGARSMYSDRVPLAHITGNPTLGEDKPAFFCIKAYISFIKS
DQAMWYRACKTCNKKVTDAVGSGYWCEGCQKNEQDCSLRYVMVVKVSDASGEAFLSVFND
QAEKIMGCTADELHELRSQEDGAYEMRLKEALWGGHVFRVSVRPHEYNNEKRQRITVRGV
AGVDYGAESNHLIQHLSNITI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcggtgactccagatgcggtttccactatcttagcgaatccctgtcccgat
tcgtcttcagaattgcccgaaatcatcgtgcaagtggtcgatctgaagctcgccggctca
aaatacatgtttgtagcgaacgatggaaaaaataaggtgaagactctgttgcagtcgtca
ttatcatccttagtcaactctggagagatccagaatttgggactcattcgtgttatcgac
tacaccttgaacgacattccaacaaagaatgagaagtttttgataataaccaagtgtgag
gccgtattgcctgcgctagattcagagtacagaggtgaggtggaggttgggagtggtatt
acattaaagccaaagcaggaatccatggttaagatggagaagaaagttaatgtttctgat
tcttgtatgaagccaaagaagcaagaagttggggttaaatccgctgctgaaatagtttat
gaacagcacgggaacacggcgccggctgcgcgaatggctatgacacggaggatccattcg
ttactttcattgaatccttatcagggatactggacaattaaagtgagggtcactaacaag
ggcaatatgaggtcctacaggaattctagaggagaaggttttgtgttcaatgtagaactg
actgatgaagatggcacacaaatacaagctactatgttcaacgaggccgcgaggaagttc
tttgacaagtttcagatggggaaagtgtattacatatcaaagggaagcctgaaagtagca
aacaagcaattcaagactgtgcagaacgattatgagatgaccttgaatgagaattcccaa
gtggaggaggcgagtgatgagtcaacttttatccccgagacgaagttcaactttgttccc
attgatgaactcagtccatatgtcaatggaagggaacttgttgatgttatcggtgtgctc
caaaatgtgtctcctacaatgagcattcgaaggaaaagcaacaatgagagtattcccaag
cgcgacattaccattgctgatgagacgaagaaaacagtcgtggtttctttatggaacgat
cttgcaacaaatgtaggacaagagctgctcacaatggccgataaatcccctatagttgcg
atcaaatctgttaaagttggtgattttcagggtgtgtcgttgtcagcgctaagcaaaagt
cttgttgtcatcaatccggagacaccggaagccaaaaagttgagatcatggttcgattct
gaaggtaaggacacttgtttggatgctgctggagctggcttgagccctgcccttaaaggc
ggagctcgatccatgtactcggatagagtccctttagctcatatcactggcaacccaacc
ttgggagaggacaagccggcatttttctgcatcaaagcatacataagcttcatcaagtct
gaccaagcaatgtggtaccgtgcgtgcaagacgtgcaacaagaaagtcactgatgctgtt
gggtctgggtactggtgcgaagggtgccagaagaacgagcaagattgcagcttgaggtat
gtgatggtggtcaaggtttcggacgcaagcggcgaggctttcctctccgttttcaatgac
caagctgagaagatcatgggatgcactgcagacgagctacacgagttaagatcacaggag
gatggcgcgtatgaaatgaggctgaaggaggcgctatgggggggtcatgttttccgggtg
agcgtgaggccgcatgaatacaacaatgagaagaggcagaggatcacggttagaggcgtt
gctggagttgattatggagctgaatccaatcatttgatccaacacctatccaacatcaca
atctaa
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integrated database retrieval system
