Andrographis paniculata: 127263396
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Entry
127263396 CDS
T08689
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127263396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127263396
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127263396
Spliceosome [BR:
apan03041
]
Complex C
Other components
Step II factors
127263396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
127263396
NCBI-ProteinID:
XP_051148356
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MAAMTSNKSNTAAEISQPKRQKSDSYIRRQNIEQHRKSLPIATVEKKLLEEVSNNDTLII
VGETGSGKTTQLPQYLFNGGFCRNGGTIGITQPRRVAAVTVAKRVAEECGVTLGQKVGYA
IRFEDMTSSSTRIKYMTDGLLLREALLDQYLSKYSVIIVDEAHERTVHTDVLLGLLKSVQ
KARSQGALETISNDQTKDQNGLPLVKGYNGHPTSNLKHGQGKKLPPLKLIIMSASLDFAI
FSEFFGGARAVHVQGRQYPVETLYTYQPETDYLDATMITIFQIHLEDQPGDILVFLTGQE
EIESIQRLVQERFPKLPESKRNLLVVPIFASLPSEKQMKVFMPAPTGFRKVILATNIAET
SVTIPGIKYVIDPGMVKVRTYDASTGIEPLIIVTTSKAQALQRRGRAGREAPGKCFRLYP
ENDFYKLKDSTTPEIKRCNLANVILQLKALGIDDIVGFEFIEKPDSMAIIKSMEMLFLLG
ALTDESKLSDPVGHQMARLPLDPVYSKALIVASQFNCFQEMLIIVAMLSVESIFYAPRER
LEESRIALRSFSSQDGDHLTLLNVYRAFDEFSEKAKLVSSSEEKAAKNLKKWCKDNFINY
RSLKHAQDIHSQIQRNAEQMGLAGTSCGDDMFPLRRCLAASYFLNAALKQPDGTYRALSS
GLTVKIHPSSVLFRMKPECIIFNELVKTNQNYIRNVSVIDYLWLAELAPQFYSLQE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatgacttccaataagtccaacactgcagcggaaatcagtcaacccaagcgg
caaaaatccgatagctacatcaggagacagaacattgagcagcacaggaaatctttgccc
attgcaacagttgaaaagaaacttctcgaggaggttagcaataatgatacactgattatt
gttggagaaactgggagtgggaagacaacacagctaccacaatatctattcaatggtggg
ttttgccgaaatggtggaaccattgggataactcaacctcgacgtgttgcggctgtaact
gttgctaaaagggttgccgaggaatgtggagttactctgggacaaaaggttggatatgcc
atccgatttgaagatatgacttccagctcaacaaggattaagtacatgacagacggcttg
ttgttgagggaagcattgttggatcaatatctctccaagtattcggttattattgtggac
gaggctcatgaaagaactgtacacactgatgtattgcttggcctgttgaagagtgtgcaa
aaagctaggtctcagggtgctcttgaaacaattagtaacgatcaaacaaaagatcagaat
ggcttaccgttggtaaaagggtataatggccatcccaccagcaatttgaagcatggccaa
ggaaaaaagttgcctcctttgaagttgattatcatgtctgcaagtctagactttgcaatc
ttttcggagttttttggtggtgcaagggctgttcatgtccaggggcgccaatatcctgtt
gaaacattgtacacctatcaacctgagaccgattacctagatgcaacaatgattaccatt
tttcagattcacctggaggatcaacccggtgatatacttgtgttcttaactggccaagaa
gaaatagaatctatccagagattagtccaagagcgtttcccaaagttacctgagagtaaa
cggaatcttttagttgttcctatatttgcatctctcccatcagagaaacagatgaaagtt
ttcatgccagctccaactggatttcgtaaggtaattttggcaacaaatattgctgagaca
tctgtgacaatacctggaatcaagtatgtcattgacccgggaatggttaaagtacgcaca
tatgatgcttctactggaatcgagcctttgattatagttacaacctcgaaagcacaggca
cttcagaggagagggcgagctggtcgtgaagcacctgggaaatgctttcgtctttatcca
gagaatgacttttacaagctgaaagattccacaacaccagaaattaaaagatgcaatctt
gcaaatgttattttgcagctgaaagctttgggaatcgatgatattgttggttttgagttc
attgaaaaaccagacagtatggctatcatcaagtcaatggaaatgctattcttgttaggt
gctctaacagacgaaagtaaattatcagacccagttggtcaccaaatggcgagacttccg
ttggatcctgtttattctaaggcgctcattgttgctagtcagtttaattgctttcaagaa
atgctgataattgtcgcaatgctatctgttgaatccatattctacgcaccccgtgaaaga
ttagaagagtcacggattgcattgagaagtttctcgagccaagatggagatcatctaacc
ttactaaatgtgtaccgtgcctttgatgaattctccgagaaggctaagctcgttagcagc
agcgaagagaaagctgcaaagaatctcaagaaatggtgcaaagacaattttattaattac
cgttccctaaagcacgcacaggatatacacagccaaatacaaaggaatgccgagcaaatg
ggtttggctggaacttcttgtggagacgacatgtttccactccgtagatgcttagctgct
tcatattttctcaacgcggcattgaaacagccggatggaacttacagggctttgtcaagt
ggtctgacggttaagatacatccttcatctgtcctgtttcggatgaaaccggagtgcatc
attttcaatgaattagtgaagacaaatcaaaattatatccgaaatgtttcagtcatagat
tacttgtggttagccgagctggcgcctcaattttatagcctgcaggagtga
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