Andrographis paniculata: 127263655
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Entry
127263655 CDS
T08689
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127263655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127263655
03009 Ribosome biogenesis [BR:
apan03009
]
127263655
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127263655
Spliceosome [BR:
apan03041
]
Complex A
U1 snRNP components
U1 related factors
127263655
Complex B
127263655
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
Helicases
127263655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
127263655
NCBI-ProteinID:
XP_051148743
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MATAEASPSTLGPRYAPDDPTLPEPWKGLIDGSTGVLYYWNPETNVTQYEKPSTLQPPLP
SRPPPVASTSTTNAVLSFKASQPDGIQNHHLMQTQHPQGMLISSSLQQQSQLAPQGTRQQ
VVAPGQLQGSHLGLTMQQAPSAPEETKHQVPLGQMHIEPGHQGVVQQIPMQPGHQSPYQP
MPRVQHGQMYPGTQMGTSHGFQFTPQHTQFMVPQQSMPLQGPQSSSQQSQHLNQMSHRQD
HKVDLGPRDETDYFQGKKVSPSHPLVIQGQSFPHHHEPKIGVPHRDNLEFQQVNQPVFST
AQQTGAPVQNLSVGTNSPHTQNMNVRPSLPYGGSSANVQHNNPSVQVQQKGVEPTHPQYG
SRFQTQLDPGLMHDKMQYDESHLARAKNEYFYNATKDANILAHQLPKLAPLPMTRNQQEA
RMSELPSQNSVPILPGSLNGGPPLHGGYDLSSAALPYPGNAFVRPPSAVTRPSDPTTQLS
AAEIYCQKHEVTATGEDVPAPYMTFEATGFPPEILQEMHFAGFSAPTPIQAQTWPITLQN
RDVVAIAKTGSGKTLGYLIPAFIHIRRRHNNPQNGPTVLVLAPTRELATQIQDEAIKFGR
SSRVSCTCLYGGALKGPQLKELDRGADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADR
MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLFNPVQVNIGSVDELAANK
SITQYVEVVPEMEKQRRLEQILRSQERGSKVIIFCSTKKLCDQLARILGRYFGAAAIHGD
KSQGERDWVLNQFRMGKAPVLVATDVAARGLDIRDIRVVINYDFPTGIEDYVHRIGRTGR
AGATGVSYTFFSEQDWKYAPDLIKVLEGANQVVPTEIRDIAVRGGPTFGKDRGGMSRFDA
ADGGGGRWDSGSRGAPRDGGFGGRAGMRDGGRGGIRDGGFSGRGGMRDGGFGSRGRGRVG
GRDGGFGGSGGRIGWERGGRGGPHDRFNNMDTRGRGRGRGRGRFDNRRDSPDRSRGRSMS
RSPERVRTWDYSRSRSRSRSSRDKSRNRSRSRSRSRSWSRDRRSYSRSRSRSRSRSSWSS
RSRSRSRSRSRGSYERRRPRRPTKFDQIEVPAVAAAAVPIVESEGKLPMSPPGPNTGAAA
AAAAAAAAAAADSSSLDRNTLSSQPRQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgaggcatcaccgagtacccttgggcccagatatgctccagatgatcca
actctacctgaaccttggaaaggattaattgatggaagcacaggcgttttgtattactgg
aatcctgaaacaaatgttacccagtatgaaaaaccctcgactttacaaccacctttgcct
tctaggcccccacctgtagcatccacatctacgacgaatgctgtactttcattcaaagcc
tcacagccagacggtatccaaaaccatcacttgatgcaaactcagcatccacaggggatg
cttataagttcatccttgcagcaacagagtcagttagcaccacagggcactcgtcagcaa
gtagtggcccctgggcagctgcaaggttcacatttggggctgacgatgcagcaggcccct
tcagctcctgaggaaacaaagcatcaggtccctctgggacaaatgcatattgagcccggg
catcagggagttgtgcagcaaattcctatgcagccagggcaccaatccccttatcagcca
atgccccgtgttcagcatggacaaatgtatccaggtacacaaatgggaacttcacatggt
tttcaattcactcctcagcacacgcagttcatggtgcctcaacagagcatgccactacaa
ggaccacaaagctcctcccaacagtctcagcatttaaatcagatgtctcacagacaagat
cataaagtggatcttggtcccagagatgaaactgattattttcaaggaaaaaaagtttcg
ccatcgcatccacttgtaattcagggacagtcatttccccatcaccatgaaccaaaaatt
ggagtccctcacagagataatcttgagtttcagcaggtgaatcaaccagtgttttcgaca
gctcaacaaactggggcacctgtgcagaacttgtcagttggaactaattccccgcacaca
caaaacatgaacgttcgaccgagtctgccatatggtggatcatctgctaatgtgcaacat
aacaacccttcagttcaggtgcaacaaaaaggggtagaaccaacacatccacaatatggt
tctaggtttcaaactcaacttgaccctgggctgatgcatgacaagatgcaatacgacgaa
agccatcttgctagggctaaaaatgaatatttttataatgcaacaaaggatgccaatata
ttggctcatcagctacccaaactcgcaccgttacctatgacaagaaatcaacaggaagca
aggatgagcgaattgccttctcaaaactctgtccccattcttccaggcagtttgaatgga
gggcctcccttgcatggtggctatgatctttcatctgctgccctgccttatcctggaaat
gcttttgtgaggcctccttcagcagtgacaagaccttctgaccctactacccagttatct
gcagctgaaatttattgtcaaaagcacgaagtaacagccactggagaagatgttccagct
ccatatatgacatttgaagccactggatttccgccagaaatactacaggagatgcatttt
gcgggtttttcagctcccactccaattcaagctcaaacatggcccattactttgcaaaac
cgggatgtagttgctattgcaaagactggctctgggaaaacattgggatatttgatccca
gcattcattcatatcagacggcggcataacaatcctcagaatggtccaacagtacttgta
ttggctccaactagggagcttgccacccaaatccaggatgaagcaatcaaatttggtcga
tcctcgagagtgtcctgcacgtgcttatatggcggggctcttaaaggccctcagctgaaa
gagctagatcgtggggctgatatagttgtggcaactcctggtcgacttaacgacatactt
gaaatgaagcggattgactttaggcaggtctcactccttgttcttgatgaggctgataga
atgctggatatgggatttgagccacagattcgtaagattgttaatgaaattcctccaaga
aggcaaacacttatgtatactgcaacatggcccaaagaagtccggaagatagcaagtgat
cttcttttcaacccagtacaggtcaacattggcagtgttgatgaacttgctgcaaacaaa
tctatcacacagtatgttgaagtagtccctgaaatggagaagcagaggcggctggaacaa
attcttagatcccaagaacgtggttcaaaggtcattatattttgctctactaagaagttg
tgtgaccagctagcacgtatccttggccgttactttggggcagctgcaatacatggagac
aaatctcaaggcgagcgagactgggtcttgaatcaatttcggatgggcaaagccccggtt
cttgttgctactgatgttgctgctcgaggacttgatataagagacataagggtggttata
aactatgactttccaaccggtattgaagactatgttcaccgtattgggcgaactgggaga
gctggtgctacaggggtttcatacactttcttctcggagcaagactggaagtatgctcct
gaccttattaaagttttagaaggtgctaatcaagttgtgcctactgagatacgggatata
gcagtacgtggtggacctacttttggcaaggatagaggtggtatgagtcgttttgatgct
gctgatggtggtggtggtcgttgggactcgggcagtcgtggtgccccaagggatgggggc
tttggcggtcgtgcagggatgagggatggagggcgtgggggaattagggatggaggtttt
agtggtcgtggaggaatgagggatggcggctttggcagccgcgggcgtgggcgtgtgggg
ggaagggatggcggttttggtggatccggtggtcggattggatgggaaaggggtggacgt
ggtggtccacatgatcggttcaacaatatggatacacgagggcggggtagagggcgtggg
cgaggacgatttgataaccgcagggacagcccagatagaagtagggggagaagtatgagc
cgaagccctgaaagagttcgaacgtgggattacagtagaagccgcagtcggagcagaagc
agcagggacaagagtaggaataggagtaggagcaggagcagaagcagaagttggagcaga
gataggaggagttatagcagaagtcgaagcaggagcagaagcagaagcagctggtcaagc
cgcagccggagcaggagcaggagcagaagtcgcggcagctatgagagaaggcggcctcgg
cgtccaacaaaatttgatcagattgaagttccagcagtagcagcagcagcagtacccatt
gtggaatcggaaggaaagttgccaatgtctcctcctggacccaacaccggagctgccgcc
gctgctgctgctgctgctgctgctgctgctgcggattcttcttcgttggatcgaaatact
ctgtcttctcaaccaagacaataa
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