Andrographis paniculata: 127263656
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Entry
127263656 CDS
T08689
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127263656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127263656
03009 Ribosome biogenesis [BR:
apan03009
]
127263656
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127263656
Spliceosome [BR:
apan03041
]
Complex A
U1 snRNP components
U1 related factors
127263656
Complex B
127263656
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
Helicases
127263656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
127263656
NCBI-ProteinID:
XP_051148745
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MATAEASPSTLGPRYAPDDPTLPEPWKGLIDGSTGVLYYWNPETNVTQYEKPSTLQPPLP
SRPPPVASTSTTNAVLSVKASQPDGIQNHHLMQTQHPQGMLISSSLQQQSQLAPQGTRRQ
VVAPGQLQGSHLGLTRQQAPSAPEETKHQAPLGQMHIEPGHQGVVQQIPMQPGHQSPYQP
MPRVQHGQMYPGTQMGSSHGFQFTPQHAQFMVPQQSMPLQGPQSSSQQSQHLNQMSNRQD
HKVDLGPRDDTDYFQGKKVSPSHQRVIQGQSFPHHHEPKMGVPHRDDLEFQQVNQPVFST
VQQTGAPVQNLSVGTNSPHTQNMNVRPSLPYGGSSANVQHNNPSVQVQQKGVEPTHPQYG
SRFQTQLDTGLMHGKMQYDESHLARAKNEYFYNTTKDANILTHQLPKLAPLPMTRNQQEA
RMSELPSQNSVPNLPGSFNGGPPLHGGYDLSSAALPYPGNAFVRPPSAMTRPSDPTTQLS
AAEIYRQKHEVTATGEDVPAPYMTFDATGFPPEILQEMHFAGFSAPTPIQAQTWPITLQN
RDVVAIAKTGSGKTLGYLIPAFIHIRRRHNNPRNGPTVLVLAPTRELATQIQDEAIKFGQ
SSRVSCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKRIDFRQVSLLVLDEADR
MLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLFNPVQVNIGSVDELAANK
SITQYVEVVPEMEKQRRLEQILRSQERGSKVIIFCSTKKLCDQLARSLGRYFGAAAIHGD
KSQGERDWVLNQFRMGKAPVLVATDVAARGLDIRDIRVVINYDFPTGIEDYVHRIGRTGR
AGATGVSYTFFSEQDWKYAPDLIKVLEGANQVVPTEIRDIAVRGGPTFGKDRGGMSRFDA
ADGGGGRWDSGSRGAPRDGGFGGRAGMRDGGRGGIRDGGFSGRGGMRDGGFGSRGRGRVG
GRDGGFGGSGGRIGWERGGHGGPHDRFNNMDTRGRGRGRGRGRFDNRRDSPDRSRGRSMS
QSPERVRTWDYSRSRSRSRSSGDRSRSRSRSRSRSRSRSWSRDRRSYSRSRSRSRSRSSW
SSRSRSRSRSRGSYERRRPRRPTKFDQIEVPAAAVPIVESEGKLPMSPPGPNTGAAAAAA
AAADSSSLDPNTLSSQPRQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctgaggcatccccgagtaccctagggcccagatatgctccagatgatcca
actctacctgaaccttggaaaggattaattgatggaagcacaggcgttttgtattactgg
aatcctgaaacaaatgttacccagtatgaaaaaccctcgactttacaaccacctttgcct
tctaggcccccacctgtagcatccacatctacgacgaatgctgtactttcagtcaaagcc
tcacagcccgacggtatccaaaaccatcacttgatgcaaactcagcatccacaggggatg
cttataagttcatccttgcagcaacagagtcagttagcaccacagggcactcgccggcaa
gtagtggcccctgggcagctgcaaggttcacatttggggctgacgaggcagcaggcccct
tcggctcctgaggaaacaaagcatcaggcccctctggggcaaatgcatattgagcccggg
catcagggagttgtgcagcaaattcctatgcagccagggcaccaatccccctatcagcca
atgccccgtgttcagcatggacaaatgtatccaggtacacaaatgggaagttcacatggt
tttcaattcactcctcagcacgcgcagttcatggtgcctcaacagagcatgccacttcaa
ggaccacaaagctcctcccaacagtctcagcatttgaatcagatgtctaacagacaagat
cataaagtggatcttggtcccagagatgatactgattattttcaaggaaaaaaagtttca
ccatcgcatcaacgtgtaattcagggacagtcatttccacatcaccatgaaccaaaaatg
ggagtccctcacagagatgatcttgagtttcagcaggtgaatcaacctgtgttttcgaca
gttcaacaaactggggcacctgtgcagaacttgtcagttggaactaattccccgcacaca
caaaacatgaacgttcgaccgagtctgccatatggtggatcatctgctaatgtgcaacat
aacaacccttcagttcaggtgcaacaaaaaggggtagaaccaacacatccacaatatggt
tctaggtttcaaactcaacttgacactgggctgatgcatggcaagatgcaatatgacgaa
agccatcttgctagggctaaaaatgaatatttttataatacaacaaaggatgccaatata
ttgactcatcagctacccaaactcgcaccgttacctatgacaagaaatcaacaggaagca
aggatgagcgaattgccttctcaaaactctgtccccaatcttccaggcagttttaatgga
gggcctcccttgcatggtggctatgatctttcatctgctgccctgccttatcctggcaat
gcttttgtgaggcctccttcagcaatgacaagaccttctgatcctactacccagttatct
gcagctgaaatttatcgtcaaaagcacgaagtaacagccactggagaagatgttccagct
ccttatatgacatttgatgctactggatttccgccagaaatactacaggagatgcatttt
gcgggtttttcggctcccactccaattcaggctcaaacatggcccattactttacaaaac
cgggatgtagttgctattgcaaagactggctctgggaaaacattgggatatttgatccct
gcattcattcatatcagacggcggcataacaatcctcggaatggtccaacagtacttgta
ttggctccaactagggagcttgccacccaaatccaggatgaagcaatcaaatttggtcaa
tcctcgagagtgtcctgcacgtgcttatatggcggggctcctaaaggccctcagctgaaa
gagctagatcgcggggctgatatagttgtggcaactcctggtcgacttaacgacatactt
gaaatgaagcggattgactttaggcaggtctcactccttgttcttgatgaggctgataga
atgctggatatgggatttgagccacagattcgtaagattgttaatgaaattcctccaaga
aggcaaacacttatgtatactgcaacgtggcccaaagaagtccggaagatagcaagcgat
cttcttttcaacccagtacaggtcaacattggcagtgttgatgaacttgctgcaaacaaa
tctattacacagtatgttgaagtagtccctgaaatggagaagcagaggcggctggaacaa
attcttagatcccaagaacgtggttcaaaggtcattatattttgctctactaagaagttg
tgtgaccagctagcacgtagccttggccgttactttggggcagctgcaatacatggagac
aaatctcaaggcgagcgagactgggtcttgaatcaatttcggatgggcaaagccccggtt
cttgttgctactgatgttgctgctcgaggacttgatataagagacataagggtggttata
aactatgacttcccaaccggtattgaagactatgttcaccgtattgggcgaactgggaga
gctggtgctacaggggtttcatacactttcttctcggagcaagactggaagtatgctcct
gaccttattaaagttttagaaggtgctaatcaagttgtgcctactgagatacgggatata
gcagtacgtggtggacctacttttggcaaggatagaggtggtatgagtcgttttgatgct
gctgatggtggtggtggtcgttgggactcgggcagtcgtggtgccccaagggatgggggc
tttggcggtcgtgcagggatgagggatggagggcgtgggggaattagggatggaggtttt
agtggtcgtggaggaatgagggatggcggctttggcagccgtgggcgtgggcgtgtgggg
ggaagggatggcggttttggtggatccggtggtcggattggatgggaaaggggtggacat
ggtggtccacatgatcggttcaacaatatggatacacgagggcggggtagagggcgtggg
cgaggacgatttgataatcgcagggacagcccagatagaagtagggggagaagtatgagc
caaagccctgaaagagttcgaacgtgggattacagtagaagccgcagtcggagcagaagc
agcggggacaggagtaggagtaggagtaggagtaggagcaggagcagaagcagaagttgg
agcagagataggaggagttatagcagaagtcgaagcaggagcagaagcagaagcagctgg
tcaagccgcagccggagcaggagcagaagtcgcggcagctatgagagaaggcggccacgg
cgtccaacaaaatttgatcagattgaagttccagcagcagcagtacccattgtggaatcg
gaaggaaagttgccaatgtctcctcctggacccaacaccggagctgccgccgccgccgct
gctgctgcggattcttcttcgttggatccaaatactctgtcttctcaaccaagacaataa
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integrated database retrieval system
