Andrographis paniculata: 127264047
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Entry
127264047 CDS
T08689
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127264047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127264047
Spliceosome [BR:
apan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127264047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
PRP4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
WD40_like
TraF
Motif
Other DBs
NCBI-GeneID:
127264047
NCBI-ProteinID:
XP_051149350
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MESASGAEQSVPPASSETVVTATDITSIQPVIAPVVAPPVIPPLAPIAAAPRPTPAPLNP
IPVRPPVNRPSVAQDNGDSRTSDSGSDEEEPESSGAAAREYEVSEESKKVKERQEKAVQE
LLMKRRAAALAVPTNDNSVRARLRRLGEPITLFGEREMERRDRLRTLMAKLDSEGQLEKL
MKAHEEEEAASTAAPSELEEEIQYPFFTEGSQALLEARREIAKYSLVRSALRLHRTRRKR
DDPDEDLDAEIDWSLKQASYLGLECSEIGDDRPLSGCSISHDGKMLATCSLSGIAKVWKM
PEVRKISALKGHTERATDIAFSPISNQVATASADRTARLWNFDGSALRTYSGHLDRLARI
AFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSIYGITFHHDGSLAASCGLDSLA
RVWDLRSGRSILALEGHVKPVLGANFSPNGYHLATGGEDNTCRIWDLRKRKTLYIIPAHA
NLISQVKFEPHDGYLLVTASYDMTAKIWSSRDFKPVKTLSGHESKVTSLDITGDGQCIAT
VSHDRTIKLWTSKETDKEKEMDID
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgcatctggtgctgagcaatctgttccacctgccagcagtgaaactgtggtt
accgccaccgacataacctcaattcaaccggtgattgcacctgtcgttgcaccgccggtg
attcctcctctcgctccaatagctgctgctcctcgtccgactccggcgccattgaatccg
atacctgtccgtcctccggtcaacaggccttcagtagcacaggataacggcgactcgaga
accagtgattcaggttcggatgaggaggagccagaatcgagcggcgccgctgctcgggag
tatgaggtatcagaagaaagtaaaaaggttaaggaacgacaggagaaagcagtgcaggaa
cttctaatgaaacgccgagcggctgccctagcggttccgacgaacgacaattctgtccgt
gcgcgcctccggcgcctcggcgaaccgatcactctgttcggagagagggagatggaaagg
cgtgatcggctgaggacgcttatggcgaaacttgattcagaaggtcaactggagaaacta
atgaaagctcatgaggaagaggaagctgcgtcgacggcggcgccgtcggagcttgaggaa
gaaattcagtatccatttttcactgaaggttctcaggcactgttagaagctcgtagagag
atcgcgaagtactctctggtgagatcagcactacgcctgcaccgaacaagaagaaaacgg
gatgatccggatgaagatttggatgcagagatcgattggtcactgaaacaggcgtcgtat
ttgggcctcgagtgcagtgagattggtgatgatcgacctctatctggttgctcaatttca
catgatggaaagatgcttgccacttgctctctaagcgggattgcaaaagtgtggaagatg
ccggaagtaaggaagatatccgcacttaagggccataccgaacgagctactgatattgca
ttctctcccatcagcaaccaagtggctacagcctccgctgacaggactgcaagactctgg
aatttcgatgggtctgcccttcgaacatacagtggccatttggatcgtcttgcacgtatc
gcattccatccatcaggaaaatatttaggtacagccagttttgacaaaacatggagatta
tgggatgtagagacgggcgaggagctgcttctccaagaaggtcatagtagaagtatctac
gggatcacttttcatcatgatggttcattagcagcttcttgtggattggattctcttgct
cgtgtttgggatctaagatccggaagaagtattcttgctttggaaggccatgtcaagcct
gtgctcggtgccaacttttctccaaatggttatcacttagccactggtggtgaagacaat
acttgcaggatatgggatttgaggaagagaaaaactctgtacataatacctgcacatgct
aacctcatttctcaagtgaaattcgaacctcatgacgggtaccttttggtcacagcctca
tatgatatgactgctaagatatggtcgtcaagagactttaagcctgtgaagacactatca
ggccatgaatcaaaagttacgtcacttgatatcaccggagatggacaatgcattgcaact
gtttcgcatgatagaacaatcaagctgtggacaagcaaagagactgataaagagaaggag
atggacattgactga
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integrated database retrieval system
