Andrographis paniculata: 127264193
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Entry
127264193 CDS
T08689
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127264193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127264193
03012 Translation factors [BR:
apan03012
]
127264193
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127264193
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127264193
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127264193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
T2SSE
NPHP3_N
AAA_19
Rad17
NACHT
IF3_C
ATPase
Motif
Other DBs
NCBI-GeneID:
127264193
NCBI-ProteinID:
XP_051149601
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MSLHVRRSVFCCGCFSPLAHKSRSLRSFAVNLRIAGNRKLFPRSLIRISSFSSMSHRPNF
QGGRRGGGRGGGGRGGGGRGGGGRGGGGRGGEQRWWDPVWRAERLRQTAPKIEAMDQNEW
WGKMEEMKKGGEQEMIIRRYFSREDQQILGDMANQLSLYFHAYNKGKALVVSKVPLPDYR
ADLDERHGSTKKEINMSSEIERRVGNLLNSSSGSRPAEINSSSSSQNAASQSKLAELNNR
VMLQTGIGTEDLNLELKQKQDNLRESDSVKTMLAFREKLPAYKLKSEFLKAVAENQVLVV
SGETGCGKTTQLPQFILEEEISSLRGSSCSIICTQPRRISAISVAARISSERGEKLGDTV
GYKIRLESQCSAQTRLLFCTTGVLLRQLVQDPDLSGITHLLVDEIHERGMNEDFLLIILR
DILTRRPDLRIILMSATINADLFSKYFGNAPTIHIPGFTFPVKEFYLEDVLEKTRYSIQS
DSDNYSGNSRRGRRQQEPTKDPLTELFEDADIDSLYKGYSRNTRQSLEAWSGSKLDLGLV
ETTIEHICCREDIGAILVFLSGWDEISKLLDKIKANRILGDASKFLVLPLHGSMPTINQR
EIFDRPPPNVRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKA
SAHQRRGRAGRVQPGVCYRLYPKMIHDAMPEYQLPEMLRTPLQELCLNIKSLQLGSISTF
LSKALQPPDPRSVENAVELLKTIGALNENEELTPLGRHLCTLPLDPNIGKMLLMGAIFQC
LNPALTIAAALAHRDPFVLPLNRKEEADAAKRFFAGDSCSDHIALLKAFEGWKDAKRNRN
DKSFCWENFLSPVTMQMMEDMRLQFLDFLSGIGFVNKSLGPQAYNKYSNDLEMVCAILCA
GLYPNVVQCKRRGKRTAFYTKEVGKVDIHPASVNAAVHLFPLPYMVYSEKVKTNLIYIRD
STNISDYALLMFGGNLVPSKSGDGIEMLDGYLHFSASKPVLDLIRKLRGELDKLLTRKIE
EPGLDVTVEGKGVVAAVIELLHNQNIR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcacgttcgccgcagcgtcttctgctgcggttgcttttccccactcgctcat
aagagtcggtccctgcgctcattcgccgtgaatcttcgaattgccggcaatcggaagttg
tttccgagaagtttgattcggatctcgtcattttcttccatgtctcaccgccctaacttc
caaggcggccgtcgtggcggcggaagaggtggaggtggacgaggcggtggcggaagaggt
ggaggtggacgcggcggcggcggaagaggtggtgagcagcggtggtgggatcctgtatgg
cgagctgagcgcttgcgtcaaacagcacccaagatagaggcaatggatcagaatgaatgg
tgggggaaaatggaagaaatgaagaaaggaggggagcaggagatgataataaggcgatat
ttcagcagagaagatcagcagatattgggcgatatggctaatcaattgagcctttatttt
catgcatataataaagggaaggcacttgttgtgagcaaagttccattgcctgattatcgg
gcagatcttgatgagcggcatggctcaacaaagaaagagataaacatgtcctcagagatt
gaaagaagagttgggaatttgttgaatagttccagtgggtcaagacctgcagagatcaat
tcttccagttcttctcagaatgcagcatcacaatccaaactggctgaacttaacaacaga
gtaatgttgcagactggtattggcacagaggaccttaatttggaactgaaacagaagcag
gacaacctgagggaaagtgatagtgtaaagacaatgctagcatttagagagaaactccca
gcttataaactgaaatctgagtttttaaaagctgtagcagaaaatcaggttctggtagta
tcaggagaaacgggttgtgggaaaaccacccagctccctcagtttatcctggaagaggag
atatcatctctaagaggttctagttgtagtataatatgcacccaacctcgtagaatatct
gcaatatcagttgctgctcgaatatcctcagaaaggggagagaagcttggtgacactgta
ggctataagattcgtctggaatcacaatgctctgctcaaacaagattactcttttgcaca
actggagttttgcttcggcagctggtgcaggatccagatttaagtggaattactcatttg
ctggtggatgaaattcatgaaagagggatgaatgaggacttcctgctaataatattacga
gacatcctcactcgccgtccagaccttcgcattatcctgatgagtgccacaatcaatgct
gacttattctcaaaatactttggaaatgctcccactattcatatccccggatttaccttt
ccagtgaaagaattttatctagaagatgttttggagaaaactcgttacagtattcaatca
gattctgacaattattcaggaaactctagaagaggtcggcgacaacaagagcccacgaaa
gatcctttgacagaactatttgaggacgcagatatagattcactctacaaaggctacagc
agaaacaccagacaatcacttgaagcttggtcgggttctaagctggacttgggacttgtg
gaaacaactattgagcatatatgttgccgtgaagatattggagcaattcttgttttcctt
tctggatgggatgaaatttcaaagctcctcgataaaatcaaagctaacagaattctggga
gatgcaagtaaattcttagttcttccacttcatggctcaatgcctactattaatcaacga
gagatttttgaccgtccacctcctaatgttagaaagattgtgctagcaaccaacattgct
gagagtagcattacgatagatgatgttgtgtacgttgtggattgcgggaaggcaaaagag
acaagttacgatgctcttaacaaactagcttgccttttaccttcatggatttctaaggcg
tcagctcatcagagacgtggtcgtgcgggtcgtgtgcaaccgggagtttgctacagacta
tatcccaaaatgatccatgacgctatgccggaataccagctgcctgaaatgcttcgaact
cctctgcaggagctatgtctgaatatcaagagcttgcagcttggttcaatcagtacattt
ttgtcaaaggctctccagccacctgatccgcgctctgtggaaaatgccgttgaacttctc
aaaacaattggcgctctaaatgaaaatgaagagctcactccacttggacggcatctctgc
acattgcctctggacccgaatattggaaagatgcttctcatgggtgcaatctttcagtgc
cttaaccctgcgctaacaatagccgctgcccttgctcatcgtgacccgtttgttcttcca
ttaaataggaaagaggaagccgacgctgcgaaaagattcttcgccggtgattcatgcagc
gatcacattgcgctcctcaaagcattcgaaggctggaaagacgcgaaacgtaatagaaat
gacaagtctttctgttgggaaaattttctgtcgccggtaaccatgcaaatgatggaagac
atgaggcttcagttcttggatttcctgtccgggattggtttcgtaaacaaatccttaggc
cctcaagcgtacaacaaatacagcaacgatctggagatggtatgcgcgattctctgtgcg
ggactctacccgaatgttgtgcagtgcaaaagacgcggaaagcgaaccgcattctacacg
aaagaagtcggtaaagtggacattcatcctgcgtcggtaaacgccgccgttcatctcttc
ccgctcccgtacatggtgtacagcgaaaaggtgaaaaccaacctcatctacatacgagac
tcgaccaacatatccgattacgcgctgctcatgttcggagggaatcttgtcccgagcaaa
agtggggacggcatcgaaatgctcgacggttacctgcacttttccgcgtcgaagcctgtg
ttggacctaatacggaaacttcgcggggagctcgacaagcttctcacccggaaaatcgag
gagccggggctcgacgtaacggtggaggggaagggtgttgttgcagctgtaatcgagttg
ttgcacaaccaaaatattcggtaa
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