Andrographis paniculata: 127265101
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Entry
127265101 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127265101
KO
K06100
symplekin
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127265101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127265101
03019 Messenger RNA biogenesis [BR:
apan03019
]
127265101
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127265101
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127265101
U7-dependent histone pre-mRNA processing factors
127265101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
127265101
NCBI-ProteinID:
XP_051150744
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MAGAPPREQALPLLAAANNHADLAVKLSSLKQAKDILLSVEPSQAAELFPYLLDLQSSPE
TLVRKYLLEVIDGIGSKTREHLSMLLPVLLTFLRDSNPVIAKQSIAIGTKIFCIVLEELV
YQFQRRGIVERWLEEVWAWMIKFKDAVLGIIFEVGAIGPKLLAIKFLETYVLLFTLESND
FGMRNPEGMSKQGRLFNVSWIMDGHPILDPPHLMSDANQYLAILLDMLQSANSLPGSLAI
ACVNSLAAIARKRPAYYKSVLAALFEFSPSLETAKGRHAVSIQYSLRTAFLGFLRCLHPV
IAESRERLVKELRAMNAGDAADQVIRQTDKIIRNNERASREQQLNKDDHLSNQVYVSGDF
TKKRPTPLDSEDKNNNFDATSKRFRYSHHDNTASANINAAGQDHPNGISSNISVMDGDLN
PVEQMIAMIGALIAEGERGVKSLEILISNMHPDLLADIVMTNMKHLPTNPPNITKYIDPS
IDPAQVSVSNGFSTSQAVDLSSQGPAYSANTSNFPISDSSTSPNPSTDSKRDPRRDPRRL
DPRRNAAPADAPQLPLLEDNANPSLHKVVQSDVDATSPSGPLVLPPMPNISDRTSEFPTP
TTQVDLKLSEFPVASEGDQSILKDEAQVIETNEFAPDKETDIHLPPPPIGKVEDTVPLAS
VNATVFDETYSPSSQEEDQLPQDISNAEGTESAPSDLPMLPQYISLDENQQRNVSRLALE
RIINSFQNSQRTDFKQVQIALVARLFGQTDINDVIGMVQNRVVSDYEQQKGHELIMRILY
HLHSLVISDSQSNAALVYERLLLGVAKSLLINLPASDKSFSRLLGEVPCMPDSVLALLDD
ICTNSHSTTDGRGGDRVTQGLGAVWSLIMGRPPSRQACLNIALKCTIHPKDDVRAKSIRL
VSNKLYSISYLSESIEQFATDKFISALDQRSAESLLSQSSDSDKRISGQVENMETSISGS
QVSVPEISQNEASKSLQDASSNDSSVSSLQAYRIMSLYFALCTKKPILLQVVFENYARAI
NAAKQAVHRHITVLVRALGSSSSEVLHIISNPPVGSEDLLIQVLNVLSEGITPSPDLVGT
VRQLYNSRLKDASILIPVLSAFSKDEVLPIFPQLVQLPLNKFQTALAHILQGSAHTGPAL
TPVEVLVAIHEISPERDGVPLKKITDACSACFEQRTVFTQQVLMKALSQMVDLTPLPLLY
MRTVIQSIDAFPALVDFVMEILSKLVKRQIWRLPKLWVGFLKCISQTQPHSFRVLLQLPS
PQLESALNKYPNLRGPLTAFANQSGAQTSLPKSTLDVLGMPTSSLRASDPNSSAHGATFT
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccccgcccagggagcaggcgctcccactcctagcggcggcgaacaaccac
gctgatttggccgtcaagttatcctcattgaaacaggctaaggacattttgctatccgtc
gaaccctcacaagcggcggagctttttccttacttgctcgaccttcagtcctccccggaa
actctcgtcagaaagtacctactcgaggtgattgatgggattgggtccaaaacaagggag
cacctatccatgctattacctgtcctattgacatttttgagagacagcaatcccgtgatc
gctaagcaatctatagccattggcactaaaattttttgtattgtattggaagagttagta
tatcagtttcaacggcgtggtatagttgagagatggcttgaagaggtgtgggcctggatg
atcaaatttaaggatgctgttttgggcatcatttttgaggttggtgctattggtccaaag
ttgttagcaataaaatttctggaaacatatgttttactcttcaccttggagtccaacgat
tttggaatgcgcaaccctgagggaatgtcaaagcaaggaaggctgttcaatgtctcttgg
attatggatggtcatcctattctggatccaccgcatcttatgtcagatgcaaatcagtat
cttgccattttattggatatgttgcaatcagccaacagtttaccaggttccttggcaatt
gcttgtgtaaatagtcttgcagctattgcacgcaagaggccggcctactacaagtctgtg
ctggctgcactatttgagtttagtccaagtctagagactgcaaaaggtcgccatgctgtc
agcattcagtattctttgagaactgcttttctaggatttctgaggtgtcttcatcctgta
attgcagagtcaagagagagattggtgaaagaattgcgagcaatgaatgctggggatgct
gcagatcaagttattcgacaaacggataagataattagaaacaatgagcgtgcttcacgt
gagcagcaattaaataaggacgatcatctatccaaccaagtgtatgtttctggggatttc
acaaaaaaaaggccaactccattggatagtgaagataagaacaataactttgatgccacc
tctaagagattcagatacagtcatcacgacaatacagccagtgctaatattaatgctgct
ggacaggatcatcccaatgggatatcttctaatatttctgtcatggatggggatctgaat
cctgtagaacagatgattgcgatgattggtgccttgattgctgaaggcgaaaggggagtt
aaatctctggaaattcttatatccaacatgcatcccgatttacttgctgacattgtcatg
acaaatatgaagcatctgccaacgaatccacctaacattacaaaatacattgacccttca
attgatcctgcacaagtatcagtgtcaaatggtttttcaacttctcaggctgtggacctt
tcatctcaaggacctgcatattcagcaaacacatcaaattttccaatttcagattcatcc
acttcccctaatccctcaacagattcaaaacgtgatccacgaagggaccctcgtcgcctt
gacccaaggcgcaatgcagctcctgctgatgctcctcaactgcctcttctggaagataat
gccaatccttccctacataaagttgtacaatctgatgttgatgctactagcccctctggt
ccacttgttttgccacctatgcctaatatttctgatagaacatctgaatttccaactccc
acaactcaggtggacttaaagttgtcagagtttcctgtagcatcagaaggcgatcagtca
atcctgaaagatgaagcccaggttatagaaaccaatgaatttgctcctgataaggaaaca
gatatacatcttccaccaccgcctattggcaaagttgaggacactgttccactggcatca
gtgaatgctactgtttttgatgaaacatattccccatcgtcacaagaagaagaccaactt
ccacaagatatttcaaatgctgaaggaactgagagcgcaccttcagatttgcctatgctt
ccccagtacatcagcctagatgaaaaccaacaaagaaatgtgagcagactggcgcttgaa
cggataattaattcatttcagaactcacagagaacggattttaagcaagtgcaaatcgct
ttggttgctcggttatttggacagactgatatcaacgatgtgattggaatggtgcaaaac
cgtgttgtttcagattatgagcagcaaaagggacatgagctcataatgcgtatcctttac
caccttcacagccttgtaatatctgattcacaatcaaatgccgcccttgtatacgagaga
cttcttctaggggtggcaaaatcattgctaattaatttaccagcatcggacaagtctttc
agtaggcttcttggtgaagttccttgcatgcctgattctgtgttggcattgcttgatgat
atatgtaccaatagtcattcaacaaccgatggtcgtggtggagatcgagttactcagggc
cttggagcagtgtggagcttgattatgggtcggccacctagtcgtcaagcatgtcttaat
atagccttgaagtgtactattcacccgaaggatgatgttcgagcaaaatctatacgcttg
gtgtcaaacaaactatattctattagctacctttctgaaagtattgagcaatttgcaact
gataagttcatttcagctctagatcaacgttctgcagagtcattgctttcacaatcttct
gattctgataagagaatttccgggcaggtagaaaacatggaaacatcaataagtggttct
caagtttcagttcctgaaatttctcaaaatgaagctagcaagagtttacaggatgcctcc
tcgaatgattcttcagtttcatcccttcaagcttatagaatcatgtcattgtattttgca
ctatgcacaaagaaaccaattctcttgcaagtggtttttgaaaattacgctcgtgccatc
aatgcagctaagcaggctgtgcatcgtcacattactgttcttgtgagggctttggggtca
tcatcttctgaggtgctacatataatatctaatccaccagttggcagtgaagatttattg
attcaggttcttaatgtattatctgaagggattacaccatcgcctgatttagtggggact
gtcagacagttgtataattccagactaaaggatgcaagtattcttattccggttctatca
gctttttcaaaagatgaggttttaccaattttccctcagcttgtccagcttccattgaat
aagttccagacagcgctggctcatattttacagggttctgctcatacgggtcctgcacta
acacctgtagaagtattggttgcaatccatgaaatatcccccgagcgggatggcgttcca
ctcaaaaagatcacagatgcttgctctgcttgtttcgaacaacggacagttttcacacaa
caagtcttgatgaaggccttaagccaaatggtcgatctgactccacttccgctgctctat
atgagaactgtaatacaatcgattgatgcatttccagcactggtcgactttgtgatggaa
attttgtcgaaacttgtgaagagacagatttggagactgcctaaactatgggttggcttc
ttgaaatgtatatcccaaactcagccgcattccttccgcgtactgttgcagttgccgtca
cctcagcttgaaagtgctctgaacaaatacccaaatcttcgcggcccactcaccgcattc
gcgaaccaatctggcgctcagacatctctacctaagtcaacgttggatgttctcggaatg
cccacatcctccttacgtgcctcggatcctaattcctcagctcacggcgccacatttacg
tga
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