Andrographis paniculata: 127265923
Help
Entry
127265923 CDS
T08689
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127265923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127265923
03012 Translation factors [BR:
apan03012
]
127265923
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127265923
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127265923
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127265923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
R3H
HA2_C
Ank_5
HA2_N
Ank_2
AAA_22
AAA_23
ATPase
Ank
AAA_19
nSTAND3
ResIII
ABC_tran
Ank_3
Ank_4
Rad17
AAA_7
NACHT
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
127265923
NCBI-ProteinID:
XP_051151910
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MAPGSDANGGGKKRQKKGRNLFEVTNVAEATRIRIAQILEQFRVSDAEVYKFEENLTNQE
RAAVHALSRKMGLKSKSSGRGQQRRISVYKTKKAVGSVKGKENLVSFRFSEGAKSVLQDL
FTQYPPDDVEMTESKVGECSVKNGNVRGTKDDMFCKPTMNKSDIENKVESLASKIKKVPN
LRQITEERSKLPIASFEDNITSTVDSHQVVLICGETGCGKTTQVPQFLMDHAWGKGETCK
IICTQPRRISATSVAERIASERGENVGDSVGYKIRLESKGGRHSSLVFCTNGVLLRILVS
RGSGRTKKKAKKKSNSISDITHIIVDEIHERDRYSDFMLAIIRDMLPLYSHLRLVLMSAT
IDADRFSKYFGGCPIIQVPGFTYPVKSLYLEDVLSIVRSPENKHTKLDEFIKNSSLSDEH
KVALDEAIDLALSNDEFEPLLELISSEGSAGLFNHSHSITGVTPLMVLAAKGRVGDVCML
LSFGADCNLQSREGKTALDYAQQDNHTETAEIIQKHMEKTFKYSDEEQQLLDKYISNVDP
ELIDCVLIEQLLRKICSDSKIGAVLVFLPGWDDINRTRERLVASPFFRDPSRFVIHSLHS
MVPLAEQKKVFKRPQPGCRKIVLSTNIAETSVTIEDVVYVIDSGRMKEKSYDPYNNVSTL
HSSWISKASVKQREGRAGRCQPGICYHLFSKLRAASLPDFQVPEIKRMPIEELCLQVKLI
DPSCKIEEFLQKTLDPPVYETIHNAIIVLQDIGALSSDEKLTDLGEKLGALPVHPLTSKM
LFIAILLNCLDPALTLACASDYRDPFILPMLPNEKKRAQLAKSELASYYGGNGDQLAVIA
AFDCWKMAKERGEEARFCSQYFVSASTMKMLSGMRKQLETELVRNGFMPDDASRCSLNAC
DPGILHAVVVAGLYPMVGRVIPHGKRTLVETADGNKVRLHPHSTNGKLSFKRNCPEPLIV
FDEITRGDGGLHIKNCSVVAPLPLLLLATEIAVIPAENDDDDDDDGESESDDNDDDSDEN
DTMCSETLNSHRGEKIMSSPGNVVKVVADRWLPFESTALDVAQVYCLRERLSAAVLHKVT
QPQKILPEHLGASLHAIACTLSYDGMAGISLPLEDSLATMVIDQPNNSGKTANHPPRNHL
RHQNNTPHYQRGVVSIKNRHHSLPHNSTPAIGTPSSQGPVSRGNISKRMRGGNKRSC
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggttcggatgctaatggcggagggaagaagcggcagaagaaagggaggaac
ctattcgaggtcaccaatgtcgccgaagccactcgcattcggattgcgcagattctcgag
cagttccgcgtttcggacgctgaagtgtacaaatttgaagaaaacctgacaaaccaagaa
agggctgctgtgcatgcattatcccggaaaatgggcttgaagtccaaaagttctgggcgg
gggcagcaacgtcgtatttctgtgtataagaccaaaaaggcagttggctcagttaaaggg
aaggaaaatcttgtttctttcagattttcagaaggagctaaatctgttttacaggatttg
ttcactcagtatccccctgatgatgtagagatgactgaaagtaaagttggagaatgtagt
gttaaaaatggcaatgtacggggaacaaaagacgacatgttttgtaaaccaacaatgaac
aagtcagatattgagaacaaagtggaatcactcgcttctaaaataaaaaaggtcccaaac
ttgagacagatcactgaggagagatccaagcttccaattgcatctttcgaagataatatt
acatccacagtagattctcatcaggttgtgctcatatgtggtgaaactggatgtgggaaa
accacacaggtcccacaatttctaatggaccatgcatggggtaagggagagacctgcaaa
ataatttgtacacagccacgcagaatttctgccacgtcagtggctgaaaggattgcttca
gaaagaggtgaaaatgttggggattctgttggatacaagattcggctggagagcaaaggt
ggaaggcattcatctcttgtgttctgcaccaatggagttttgctccggattctagtcagc
agaggaagtggcagaacaaagaaaaaagccaaaaaaaagtcgaatagcatctctgacatc
acacacattattgtggatgaaattcatgaaagggatcgctactcagactttatgcttgca
ataatcagggacatgcttcctttgtattctcatcttcgtctggtattgatgagtgccaca
attgatgcagacagattctcgaaatactttggtggctgcccaataattcaagttcctggc
tttacatatcctgtaaaatctctctacctagaagatgtactatctattgtgagatctcca
gaaaacaaacacacgaaattggatgagtttatcaaaaactcttccttgagtgatgagcat
aaggttgctctcgatgaggctattgacttagctctgtcgaatgatgagtttgaacccctc
cttgagttaatatcttcagaagggagtgctggcctttttaatcactcgcactccataact
ggtgtaacgccactgatggtacttgctgcgaagggacgagttggtgatgtttgcatgctt
ctctcgtttggtgcggactgcaatttacagtcaagggagggaaagactgctttagattat
gctcagcaagataatcatactgaaactgctgagattatccaaaagcatatggagaagaca
tttaagtactccgatgaagagcagcaattacttgacaaatacatatcaaatgttgaccct
gaactaattgattgcgtgcttattgaacagctgttgaggaaaatatgcagtgactcaaag
atcggggctgttcttgtgtttctccctggttgggatgacataaatcgaacacgtgagaga
ttagtagccagccccttcttcagggatccttctagattcgtaatccattctctccattct
atggtaccattggctgagcaaaaaaaagtgttcaagcgcccccagcctggctgccgtaaa
attgttctttcaactaatatagcagagacttctgtcaccattgaggatgttgtttatgtt
atagacagcggtagaatgaaggaaaaaagctatgacccatacaacaatgtatcgactctt
cattcttcttggatttcgaaagcaagcgtgaaacagagggaaggacgagcagggcgttgc
caacctggtatttgttatcatcttttctcaaaacttcgggctgcttcactcccagatttc
caagtgcctgagattaagaggatgccgatagaagagctatgtctgcaggtgaagcttatc
gatccatcttgtaaaatcgaagaatttttgcagaaaacactggacccccctgtttacgag
acgatacacaatgcaatcattgttcttcaagatatcggagctctatcttctgatgagaaa
ctcacagatcttggcgagaaacttggagccctgcctgttcatccgctcacaagcaagatg
ctatttattgcaatactattgaattgtctcgatccagcattgacattagcctgtgcttcc
gactacagggacccgttcattctacctatgttgcctaatgaaaagaagagagcccaattg
gctaaatcagagctggcttcctattacggagggaatggagatcagttagccgtaatagca
gcctttgattgctggaaaatggccaaggaaagaggtgaagaagctcggttctgttctcag
tacttcgtttctgcgagcactatgaaaatgctctcaggaatgcgcaagcagcttgagact
gaacttgtccgaaatggttttatgcccgatgatgcttctcggtgcagtctaaatgcctgt
gatccaggaatccttcatgctgttgtcgttgcgggtctatatccaatggttgggagagtg
atcccgcacggtaagaggacacttgtcgaaacagctgacgggaataaggtgcggttgcat
cctcattcaaccaatggaaagttgtcgttcaagagaaattgtcctgaacctttgattgtc
tttgatgaaattacacgtggagacggggggcttcacattaagaactgtagtgttgtggct
ccacttccactattgctactggctactgagattgccgtcattccggctgaaaatgacgat
gatgatgatgatgatggtgaaagtgaatctgacgataacgatgatgatagtgatgagaat
gatacaatgtgttccgaaacactgaattcccaccgtggtgagaagattatgtcctcaccc
ggcaatgttgttaaagtcgtcgctgatcggtggcttcctttcgaatcgacggcccttgat
gtcgcgcaggtttattgtttgagggagaggctttctgcagcagttctacacaaagtgaca
cagccgcaaaagatcctaccggaacacctgggagcctcactacacgcaatagcgtgcact
ctatcctacgacgggatggccgggatctcattaccccttgaagactctcttgctacaatg
gtcattgaccagcccaacaactctgggaagacagcaaaccacccccctagaaaccacctc
aggcaccaaaacaacactccccattaccaacgcggcgttgtttctataaaaaaccggcat
cactcgttgccacacaactctactccggctattggcacaccctcctcccaaggccctgtc
tccagaggtaacatttccaaacgaatgcgcggtggcaacaagcggagctgctaa
DBGET
integrated database retrieval system
