Andrographis paniculata: 127265966
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Entry
127265966 CDS
T08689
Name
(RefSeq) protein PAT1 homolog 2-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127265966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127265966
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127265966
mRNA degradation factors
5'-3' decay
Decapping complex
127265966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
127265966
NCBI-ProteinID:
XP_051151973
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MERSDRREIYGFSKSSSSSISEKMMFDASQYDFFGKGVTMDGVELELEEEDGADDAVIRG
RSGGEDDLNNEYHLFERDEGSGLGLGLGLGSLSEIDDLATTFAKLNRVVSGPRHPGIIGD
RGSGSFSRESSSATEWGREVEFPDWNDHHMSDSEFYEENQRWSSQPHLPESLNRASSYPE
PQQLPLQHCSSEPIFVPKSSSFASLPLRDNSPLPVSARHLSASPYDVSHLALRNSSRLNR
LQNQWSSHAGVLHGDHSILLNNILQRRCGQNGLSFPTQLLSPLSQNFRPSMAQFSALQSQ
IYNTFPSPLQPSKCGVSSNKREAKLRSAPKAKHSVRFSGSGESNPPQFRSKYMTAEEIEG
ILRIQQAATHGNNDVYIDDYYHQARLAEKSGTKFRFCPQHPKEQSSKSRNNSADLQRHLH
VDALGKISFSSIRRPSPLFEADPPPSPCGDNNLNLKSSGKPLDREPMAAARVTVEDGHSL
LLDVDDIDRILQFTQPQDGGMQLRRKRHILLEGFAAALELVDPLGKSGNSIDDIVFLRIL
SFSKGQKLVRKFLRLLLPGSELTRIVCMAVFRHLRFLFGSLPLDPEDKNTANDLAKAVSI
SVAGMDLNALSACLAAVVCSSEQPPLRPIGNLSGDGASIILKSVLERATSLLRDHQVVGN
FAVPPNPALWQASFDAFFGILTKYCIKKYDGIVQSLIDRNIENSEEIDSEAARAVSREMP
VEILRASLPHTDATQKKVLLNFARRSMRIESSQSTSES
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgatagaagggaaatttatggcttctcgaagagttcgagcagctcaatt
tctgagaagatgatgttcgatgcatctcagtatgatttttttgggaaaggtgtcacaatg
gatggagttgaattggaattggaagaagaggatggagctgacgatgctgtaattaggggc
agatctggtggagaagatgacctgaataatgagtatcatttgttcgaaagagacgaggga
tcgggattgggattaggattaggattaggatcgttgtctgaaatagatgatcttgcgacg
acttttgcaaagttaaacagagttgtttccggaccaagacatccgggaatcattggtgat
cgaggatctggatctttctcgagagaaagttcatcggctacagaatggggacgggaggtc
gaatttcccgactggaacgaccatcacatgtccgattccgaattctacgaggaaaaccag
cgatggtcgtcgcagcctcatctcccggaatccctaaaccgagcatcatcttaccccgag
ccgcaacagctgcctctgcaacactgctcgagtgaaccaatattcgtcccaaagtcgtca
tccttcgcttccttacctctgcgggacaattcccccttgcccgtctccgctcgacattta
tcagcctcgccctacgacgtatctcacttagccttgcggaattcctccagactgaaccga
ttacaaaaccagtggagtagccacgccggcgtgcttcatggtgatcattcgatcctcttg
aacaacatcctgcagcgtcgttgcggccaaaatggattatcattcccgactcagctgctg
tctcctctgtcacagaattttcgaccttcgatggcccagttttcggcgttacagtcccag
atatacaacacctttccttctccgttgcagccgagtaaatgcggggtatcctcaaacaag
agggaggcgaagctgcgatcggcgccaaaggctaaacattcggtacgtttctcaggttcc
ggcgaaagtaatccaccccagtttcggtccaagtacatgacagccgaagaaattgaaggt
attctccggatacagcaagccgcgacccatggaaacaatgacgtctacatcgatgattac
taccaccaggctcgtctcgccgagaaatcggggacaaagttccggttctgcccgcagcat
ccgaaagagcaatcgtcgaaatcccggaacaacagcgctgatcttcaacgacatctccat
gtcgatgctctcggaaagatttccttctcttcgatccgtaggccgtctccgctcttcgaa
gctgatcctcctccgtcgccttgtggcgacaataatctcaatctcaaatcttccggaaag
ccgctggatcgagaaccgatggctgcagcccgggtaaccgtcgaagacgggcattctcta
ctattggacgtcgacgacattgaccggattctacagtttacgcagccgcaagacggaggg
atgcagctgaggcgaaagcgccatatactcttggaaggctttgccgctgcccttgagctc
gtcgatccgctcggtaaaagcggaaactctatcgatgacatcgtgtttctccgtatcctt
tccttctcgaaaggccagaaactcgtccggaaatttcttcggcttcttcttcccgggagc
gagcttactcggattgtatgcatggctgtgttccggcatctaagatttctatttgggagc
cttccactcgatcccgaagataaaaatacggctaacgatctcgccaaagccgtctcaatt
agtgttgcgggcatggatcttaatgccctcagcgcatgtctcgccgcagtggtttgctcc
tccgagcagccgccgcttcgtccaatcgggaacctttctggtgatggtgcctcgatcatc
ttgaagtctgtgttagaacgagcgacgagcctattgagagatcatcaggtggtcgggaat
ttcgctgttcctccgaacccggccctttggcaggcgtcgttcgacgccttcttcggtatt
cttacaaagtattgcatcaagaaatacgatggcatagtccaatcgttgatcgatcgaaac
atagagaactcagaggagattgattcggaggctgcccgggctgtaagtcgagaaatgccg
gtggaaattctgcgtgctagtctgccgcacacagatgcgacccagaagaaagtgttgctt
aactttgcccggcgctcgatgcggatcgaatcttcgcagtcgacaagtgaatcatag
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