Anaeromyxobacter paludicola: AMPC_06370
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Entry
AMPC_06370 CDS
T08525
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apau
Anaeromyxobacter paludicola
Pathway
apau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMPC_06370 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apau03021
]
AMPC_06370 (rpoA)
03400 DNA repair and recombination proteins [BR:
apau03400
]
AMPC_06370 (rpoA)
Enzymes [BR:
apau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMPC_06370 (rpoA)
Transcription machinery [BR:
apau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMPC_06370 (rpoA)
DNA repair and recombination proteins [BR:
apau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMPC_06370 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BDG07524
LinkDB
All DBs
Position
721935..722951
Genome browser
AA seq
338 aa
AA seq
DB search
MADAIVTKNWRDLIKPRGLVVDQDSLTPTYGKFVAEPLERGFGITLGNSLRRVLLSSLQG
AAITSVKIEGVEHEFMTIPEVAEDVTDIILNLKEVLLQIHTNEVKTLRIEADGPKEIKAG
DIIADGQVEVLNPNHHLFTISEGGRVRVELTARRGRGYVPAERNKIAGAPIGVIPIDALF
SPIRKVNYQVTNARVGQVTDYDRLSLELWTDGSVAPVDAVAYAAKIIKEQLSIFINFDEV
EEPVAEISPVEETKLNENLFRSVDELELSVRSANCLQNANIKTIGDLVQKTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKTQPAAPKV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcgatcgtgaccaagaactggcgcgacctcatcaagccccgtgggctcgtg
gtcgaccaggacagcctcaccccgacctacggcaagttcgtcgccgagccgctcgagcgc
ggcttcggcatcaccctcgggaactccctgcgccgcgtgctcctctcgagcctgcagggc
gcggccatcacctcggtgaagatcgagggggtggagcacgagttcatgaccatccccgag
gtggccgaggacgtcaccgacatcatcctgaacctcaaggaggtcctcctccagatccac
accaacgaggtcaagaccctccgcatcgaggcggacggtcccaaggagatcaaggccggc
gacatcatcgccgacggccaggtcgaggtcctcaacccgaaccaccacctcttcaccatc
agcgagggcgggcgggtccgcgtcgagctcacggcccgccgcggccgcgggtacgtcccg
gccgagcggaacaagatcgccggggcgcccatcggcgtcatcccgatcgacgcgctcttc
agcccgatccgcaaggtgaactaccaggtgaccaacgcccgcgtcgggcaggtcaccgac
tacgaccggctctcgctcgagctctggaccgacgggtcggtcgctccggtggacgcggtg
gcctacgccgccaagatcatcaaggagcagctctcgatcttcatcaacttcgacgaggtc
gaggagccggtcgccgagatcagcccggtcgaggagaccaagctgaacgagaacctcttc
cgctcggtggacgagctggagctctcggtccgcagcgccaactgcctccagaacgccaac
atcaagacgatcggcgacctggtgcagaagaccgaggccgagatgctgaagacgaagaac
ttcggccggaagtcgctgaaggagatcaaggagatcctggccgagatggggctctccctc
gggatgaagctcgagaactggccgccgaagacccagcccgccgcgcccaaggtctag
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