Anaeromyxobacter paludicola: AMPC_06540
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Entry
AMPC_06540 CDS
T08525
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apau03009
]
AMPC_06540 (rluD)
Enzymes [BR:
apau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AMPC_06540 (rluD)
Ribosome biogenesis [BR:
apau03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AMPC_06540 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDG07541
UniProt:
A0ABN6N2X5
LinkDB
All DBs
Position
737468..738397
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AA seq
309 aa
AA seq
DB search
MPAELAGTRLDVAVTRLAPDLTRSRVQRLLADGAVRLDGRAARPAAKLRGGEELTIELPD
PAPSGMLAQDLPLAVLYEDRDLVVLDKAAGMVVHPARGTPHSTVVNALLHRFGQGPGGER
LGLVHRLDKDTSGCLVVAKTEAALAALQAAFKARSVEKTYLALCHGVLAPAGRLDTFYGR
HPTDRTRYTSKARGGRRAVTEWKLVERFGDAACLAEVALHTGRTHQIRVHLSDAGHPLVA
DAVYGGARREARLPEDHPVRRAAAALGRQALHAARLAFDHPRTGRRLRFEAPLPADFLRA
LAVLRAPPA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcggagctcgccgggacgcgcctcgacgtggcggtgacccgcctcgcccccgac
ctcacccgctcgcgcgtgcagcggctcctcgcggacggcgcggtgcggctcgacgggcgc
gccgcccggcccgcggcgaagctgcgcgggggcgaggagctcaccatcgagctccccgac
cccgcgccgtcggggatgctcgcccaggacctcccgctcgcggtgctgtacgaggaccgc
gacctggtggtgctcgacaaggcggccgggatggtggtccacccggcgcgcggcacgccc
cactcgacggtggtgaacgccctcctgcaccgcttcgggcaggggccgggcggcgagcgg
ctcgggctcgtgcaccggctcgacaaggacacctccggctgcctggtggtcgccaagacc
gaggccgccctcgccgcgctgcaggccgccttcaaggcgcggtcggtggagaagacctac
ctcgcgctctgccacggcgtgctcgcccccgccgggaggctcgacaccttctacggccgc
cacccgaccgaccgcacccgctacaccagcaaggcgcgcggcgggcggcgggcggtcacc
gagtggaagctcgtcgagcgcttcggcgacgccgcctgcctcgccgaggtggcgctccac
accggccggacgcaccagatccgcgtgcacctctccgacgccggccacccgctcgtggcc
gacgcggtctacggcggggcgcgccgagaagcgcggctcccggaggatcacccggtgcgc
cgggccgccgccgcgctgggccgccaggcgctgcacgccgcccggctcgccttcgaccac
ccccgcaccgggcggcggctgcgcttcgaggcgccgctgccggccgacttcctgcgcgcg
ctcgcggtgctccgggccccgcccgcctaa
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