Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) nuclease SbcCD subunit D
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
apau Anaeromyxobacter paludicola
|
Brite |
KEGG Orthology (KO) [BR:apau00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:apau03400]
AMPC_10440 (sbcD)
DNA repair and recombination proteins [BR:apau03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMPC_10440 (sbcD)
Archaeal homologous recombinant proteins
AMPC_10440 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1149915..1151075)
|
AA seq |
386 aa
MAFRLLHTSDWHLGRALHGESLLEDQVHALEQLRLLLREERPHAVVISGDVYDRAVPPAE
AVALLDDFLTRTRAELGIPLVLLAGNHDSGERLAFGARLLEAQGVHVRGTCRRAGEPVAL
SGGGVDCFLYPVPYVEPEVVRAETGDEALRGHAAATAAVLERARADAAGRGGVRVLAAHA
FVDGAASSESERSLTVGGSGAVPPETFAGFDYVALGHLHAPQSAGSEWLRYSGSLLKYSF
GEAAQEKGVELVELAPGEVRTRRLSLTPRRDVVQLRGTLAELLGDPAHERHRTDLVQATL
TDPGYVVDAVGKLRQRFSHVLEVQREGLTPAAVEGSFAARLAAAGGDHLRLFEGFFAEMA
GAPPGEEERRLFQEACDEVLKAGRGA |
NT seq |
1161 nt +upstreamnt +downstreamnt
atggccttccggctcctccacacctccgactggcacctgggccgtgccctccatggcgag
tcgctgctcgaggaccaggttcacgcgctcgagcagctccggctcctgctccgggaggag
cggccgcacgcggtggtgatctcgggggacgtctacgaccgggcggtgccgccggccgag
gcggtggcgctcctcgacgacttcctcacccggacccgcgccgagctcggcatcccgctc
gtgctcctcgccggcaaccacgactcgggcgagcggctggccttcggcgcccggctgctc
gaggcgcagggcgtccacgtgcgggggacctgccgtcgcgccggggagccggtggcgctg
tcgggcggcggggtggactgcttcctctaccccgtgccctacgtggagccggaggtggtc
cgggccgagaccggcgacgaggcgctgcgggggcacgccgccgccaccgcggcggtgctc
gagcgcgcccgggccgacgccgcgggccggggcggcgtccgggtcctcgccgcccacgcc
ttcgtggacggcgcggcctcgtccgagagcgagcggtccctcacggtcggcggcagcggc
gccgtcccgcccgagaccttcgccggcttcgactacgtcgcgctcggccacctgcacgcg
ccgcagagcgccgggagcgaatggctccgctacagcgggtcgctcctcaagtactccttc
ggcgaggccgcgcaggagaagggggtggagctggtcgagctcgcgcccggggaggtgcgc
acccgccgcctctcgctgacgccgcggcgcgacgtggtccagcttcgggggaccctggcc
gagctcctcggcgacccggctcacgagcggcaccggaccgatctcgtgcaggcgacgctc
accgacccgggctacgtcgtcgacgcggtcgggaagctccggcagcggttctcccacgtg
ctggaggtgcagcgggaggggctcacccccgcggcggtggagggctccttcgccgcgcgc
ctcgcggcggcggggggcgaccacctgcggctcttcgaggggttcttcgccgagatggcc
ggggcgccccccggggaggaggagcggcggctcttccaggaggcctgcgacgaggtcctc
aaggccgggaggggcgcgtga |