KEGG   Anaeromyxobacter paludicola: AMPC_11940
Entry
AMPC_11940        CDS       T08525                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
apau  Anaeromyxobacter paludicola
Pathway
apau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AMPC_11940 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apau03400]
    AMPC_11940 (uvrB)
DNA repair and recombination proteins [BR:apau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AMPC_11940 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AMPC_11940 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 UB2H AAA_22 DUF87 AAA_7 PTAC6_C SWI2_SNF2
Other DBs
NCBI-ProteinID: BDG08081
UniProt: A0ABM7X8G1
LinkDB
Position
complement(1305093..1307183)
AA seq 696 aa
MSFHIQSPHEPTGDQPRAIRELVEGLARGDRHQVLLGVTGSGKTFTVANVVSRVERPTLV
IAHNKTLAAQLYAEFKELFPEAAVHYFVSYYDYYQPEAYVPSSDTYIEKDSSINDEIDRM
RHAATHALLTRNDVLIVASVSCIYGLGTAEAYYGLLQHVEKGQEFLRDRFIRSLIDIQYE
RNDADFHRGTFRVRGDTIEVFPPYEEERAIRIEFFGDVVERIQEFDPLRGVALAELDKAA
IFPNSHYVSAPETRARAISGIRGELLERLQELRGQDKLVEAQRLEQRTMFDLEMLEQMGF
CNGIENYSRWLSGRKAGDPPPCLLDYFPDDFLLVIDESHQTVSQIGAMYKGDRSRKETLV
EYGFRLPSALDNRPLKFEEFEGMVRQAIYVSATPAAYELEKAGGVVVEQIIRPTGLVDPE
VEVRPVGSQVDDLLGEVRARAAAGERILVTTLTKRMAEDLTEYYTDVGVKCRYLHSDIDT
LERSALIRDLRRGEFDVLIGINLLREGLDIPEVSLVAVLDADKEGFLRSEVSLIQTIGRA
ARNLNGKVLLYADHVTESMKRAMDETDRRREIQRAYNREHGITPQSVKRNISDLGMAVYE
ADYLTVPVAADGAEYLPEQIPAIVAELEKEMRRASEELEFEKAASLRDRILALKDLQLGV
KRAGAGAGMKGLLGSGAMAGAGAKVGRRRPQARRRR
NT seq 2091 nt   +upstreamnt  +downstreamnt
gtgtccttccacatccagagcccgcacgagccgaccggcgaccagccgcgcgccatccgc
gagctggtcgaggggctcgcgcgcggcgaccgccaccaggtgctcctgggcgtcaccggc
tcgggcaagaccttcaccgtcgccaacgtggtgtcgcgcgtcgagcgccccacgctggtc
atcgcccacaacaagaccctcgcggcccagctctacgccgagttcaaggagctcttcccc
gaggcggcggtccactacttcgtcagctactacgactactaccagcccgaggcctacgtc
ccctcgagcgacacgtacatcgagaaggactcgtccatcaacgacgagatcgaccggatg
cgccacgcggcgacgcacgcgctgctcacgcgcaacgacgtgctcatcgtggcctcggtc
tcctgcatctacggcctcggcaccgcggaggcctactacgggctcctgcagcacgtcgag
aaggggcaggagttcctgcgcgaccgcttcatccgctcgctcatcgacatccagtacgag
cggaacgacgccgacttccaccgcggcaccttccgggtgcgcggcgacaccatcgaggtg
ttcccgccctacgaggaggagcgggccatccgcatcgagttcttcggcgacgtggtggag
cggatccaggagttcgacccgctgcgcggggtggcgctcgccgagctcgacaaggccgcc
atcttccccaacagccactacgtgtcggcgcccgagacccgcgcccgcgccatctccggc
atccgcggcgagctcctggagcggctgcaggagctgcgcgggcaggacaagctcgtcgag
gcgcagcggctcgagcagcggacgatgttcgacctcgagatgctggagcagatgggcttc
tgcaacggcatcgagaactactcgcgctggctctcgggccggaaggccggggatccgccg
ccgtgcctcctcgactacttccccgacgacttcctcctcgtcatcgacgagtcgcaccag
accgtctcgcagatcggggccatgtacaagggcgaccggtcgcgcaaggagacgctcgtc
gagtacggcttccggctcccctcggcgctcgacaaccggccgctcaagttcgaggagttc
gaggggatggtgcggcaggccatctacgtttcggccacccccgccgcctacgagctggag
aaggcgggcggggtggtggtggagcagatcatccgccccaccggcctcgtggatcccgag
gtcgaggtccggccggtgggctcgcaggtggacgacctgctcggggaggtccgcgcccgg
gccgccgccggcgagcggatcctggtcaccacgctcaccaagcgcatggccgaggatctc
accgagtactacaccgacgtgggcgtgaagtgccgctacctgcactcggacatcgacacc
ctcgagcgcagcgcgctcatccgcgacctgcgccggggcgagttcgacgtgctcatcggg
atcaacctcctccgcgaggggctcgacatccccgaggtgtcgctggtcgccgtgctcgac
gcagacaaggagggcttcctccgctccgaggtgtcgctcatccagaccatcgggcgcgcc
gcccgcaacctgaacggcaaggtgctgctctacgccgatcacgtgaccgagtcgatgaag
cgggcgatggacgagaccgaccgccgccgcgagatccagcgcgcctacaaccgggagcac
ggcatcacgccccagagcgtgaagcggaacatcagcgacctcggcatggcggtctacgag
gcggactacctcaccgtcccggtggcggccgacggcgccgagtacctgccggagcagatc
ccggccatcgtcgcggagctggagaaggagatgcggcgcgcctcggaggagctggagttc
gagaaggcggcgtcgctgcgcgaccgcatcctggccctcaaggacctgcagctcggggtg
aagcgggcgggcgccggggccggcatgaaggggctcctcgggagcggggccatggcgggg
gcgggcgcgaaggtgggccggcggcgcccccaggcgcgccggcggcgctag

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