Anaeromyxobacter paludicola: AMPC_12450
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Entry
AMPC_12450 CDS
T08525
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apau03021
]
AMPC_12450
Transcription machinery [BR:
apau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMPC_12450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
Peroxin-3
Motif
Other DBs
NCBI-ProteinID:
BDG08132
LinkDB
All DBs
Position
1363267..1364217
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AA seq
316 aa
AA seq
DB search
MTDRPEKPAEPSRPALPAPVPRGDAGLARYDPLRAYMAEVARHPVLSREEEHELAVRYSR
TGDVDAAYRLVAANLRLVVKIAHEYHRTAFNLLDLVQEGNMGLMQAVKKYDPFKGVKLSS
YAAWWIRAYIIRYLMDNWRMVKLGTTQAQRKLFFNLAKERQKLIARGVEPTPRLLARNLQ
VEEKDVEEMSARMGSEDLSLDAPVGDEDEQRGTRLDRLPGESGSPDEQLAGEQLKRLFRE
KLQAFAGTIEDEKERYIFEHRLLPPDGKEPLTLQEVGDRYRLTRERARQIESKLTRRLRE
YLKAEIPDFELLGPPE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgtccagagaagcctgccgagccttcccgcccggcgctcccggcacccgtc
ccgcgcggcgacgcggggctcgcccgctacgatcccctccgggcgtacatggccgaggtc
gcccgccaccccgtgctctcgcgcgaggaggagcacgagctcgcggtccgctactcccgg
accggcgacgtggacgccgcctaccggctggtggccgccaacctgcgcctggtggtgaag
atcgcccacgagtaccaccgcaccgccttcaacctcctggacctggtccaggaagggaac
atggggctcatgcaggcggtgaagaagtacgatccgttcaagggggtgaagctctcctcc
tacgccgcctggtggatccgcgcctacatcatccgctacctcatggacaactggcggatg
gtgaagctcgggaccacccaggcccagcgcaagctcttcttcaacctcgcaaaggagcgg
cagaagctcatcgcgcgcggggtcgagcccacgccgcgcctgctcgcccgcaacctccag
gtcgaggagaaggacgtcgaggagatgagcgcccgcatgggcagcgaggacctctcgctc
gacgcgccggtgggggacgaggacgagcagcgcgggacgcggctcgaccggctccccggc
gagtccggatcgcccgacgagcagctcgccggcgagcagctgaagcggctcttccgggag
aagctgcaggccttcgccgggaccatcgaggacgagaaggagcgctacatcttcgagcac
cggctcctcccgcccgacggcaaggagccgctcacgctgcaggaggtgggcgaccggtac
cgcctcacccgcgagcgggcgcgccagatcgagtcgaagctgacccgcaggctgcgcgag
tacctgaaggccgagatccccgacttcgagctgctcgggccgccggaatga
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