Anaeromyxobacter paludicola: AMPC_14290
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Entry
AMPC_14290 CDS
T08525
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apau03016
]
AMPC_14290 (truB)
Enzymes [BR:
apau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMPC_14290 (truB)
Transfer RNA biogenesis [BR:
apau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMPC_14290 (truB)
Prokaryotic type
AMPC_14290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDG08316
LinkDB
All DBs
Position
complement(1564723..1565625)
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AA seq
300 aa
AA seq
DB search
MTTGVLVVDKPAGPTSFDVVRRVSRLFGREKAGHTGTLDPAATGVLGVCLGEAVKLQRFL
MEGDKAYEALVAFGASTTTEDAEGELVEVRDPAGLDEARVRAALPAFVGELRQVPPMYSA
VRVDGRRLHESARRGEEVAREPRTVRVDALELLGFEPPREGRAMARLRVACGKGTYVRTL
AVDLGRALGLPAHLAALRRTAAGPFRLEQSIPLEEAERLGRETPAALAARLVPLEAALGF
LPAVRLSEGEARDLRHGRLLPLPEVPPGYSVALGPGGEVLAVCEPSGGRLKPVRVLQGTN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccggcgtcctcgtcgtcgacaagcccgccggccccacgagcttcgacgtggtg
cgccgggtgtcgcgcctcttcgggcgcgagaaggccggtcacaccggcaccctcgacccg
gcggccaccggcgtgctgggggtctgcctcggcgaggcggtcaagctgcagcgcttcctc
atggagggcgacaaggcctacgaggccctggtcgccttcggcgcctccaccaccaccgag
gacgccgagggcgagctggtcgaggtgcgcgaccccgccggcctcgacgaggcccgggtg
cgcgccgcgctgccggccttcgtcggcgagctccgccaggtgccgccgatgtactccgcg
gtccgggtggacgggcgccggctccacgagtcggcccgccggggcgaggaggtcgcgcgc
gagccgcgcaccgtccgcgtggacgccctcgagctcctcgggttcgagccgccgcgggag
gggcgggcgatggcccgcctccgggtcgcctgcgggaagggcacctacgtccgcaccctg
gcggtcgatctcggccgcgcgctcgggctgccggcgcacctcgccgcgctgcggcgcacc
gcggccggcccgttccggctcgagcagtccatccccctcgaggaggcggagcggctcggg
cgcgagacccccgccgccctcgccgcccggctggtgccgctcgaggcggcgctcggcttc
ctgccggccgtccggctctccgagggggaggcgcgcgatctgcgccacggtcgcctcctc
cctttgccggaggtgcctccggggtactcggtggcgctgggaccggggggcgaggtgctg
gcggtgtgcgagccgtccggcgggaggctcaagccggtgcgggtgctccaaggaacgaat
tga
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