Anaeromyxobacter paludicola: AMPC_23760
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Entry
AMPC_23760 CDS
T08525
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apau03016
]
AMPC_23760
Enzymes [BR:
apau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AMPC_23760
Transfer RNA biogenesis [BR:
apau03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AMPC_23760
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
BDG09263
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All DBs
Position
2694186..2694773
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AA seq
195 aa
AA seq
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MSSLRLFVALDLPAPVREDLRAFQAALRREAGAQAADVRWVDPDSVHLTLQFLGAVPEER
RGEVEAAVAAAAAQAAPATLRLAGAGAFPSPSRPRVLWAGVAGEVEPLRGLVAALGAGLA
PLGYPPEERRFSPHLTLGRARDPRGARGLAPLLSRAPPPSSAPWRAEEVTLFRSHLSPGG
ARYEPLLRARLGPGG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctccgcctcttcgtcgccctcgacctccccgcgccggtgcgcgaggacctc
cgcgccttccaggccgcgctgcggcgcgaggccggcgcgcaggcggccgacgtgaggtgg
gtggaccccgactccgtccacctcacgctgcagttcctcggcgcggtgccggaggagcgg
cgcggcgaggtggaggcggcggtcgccgccgcggccgcgcaggccgctcccgcgacgctg
cggctcgccggggccggcgccttcccctcgccgtcgcgcccgcgcgtgctctgggccggc
gtcgccggcgaggtcgagccgctccgcgggctcgtggccgcgctcggggccgggctcgcg
ccgctcggctaccctcccgaggagcgccgcttctcgccgcacctcacgctgggccgggcc
cgcgatccgcgcggcgcccgcggcctcgcgccgctcctctcgcgcgcgcccccgccgtcg
agcgcgccgtggcgcgccgaggaggtcacgctcttccgctcccacctgtcgccgggcggc
gcccgctacgagccgctgctccgggcgcggctcggccccggcgggtag
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