Anaeromyxobacter paludicola: AMPC_28360
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Entry
AMPC_28360 CDS
T08525
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apau03032
]
AMPC_28360 (gyrB)
03400 DNA repair and recombination proteins [BR:
apau03400
]
AMPC_28360 (gyrB)
Enzymes [BR:
apau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AMPC_28360 (gyrB)
DNA replication proteins [BR:
apau03032
]
Prokaryotic type
DNA Topoisomerases
AMPC_28360 (gyrB)
DNA repair and recombination proteins [BR:
apau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMPC_28360 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BDG09723
UniProt:
A0ABN6NBR1
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All DBs
Position
3238926..3241445
Genome browser
AA seq
839 aa
AA seq
DB search
MNNPEQTTGSTAPRPEELPTPERSGAGADGATNGNGDYGTDTIKVLEGLEAVRKRPHMYI
GDIGERGLHHLVYEVVDNSVDEAMAGRCDEINVTIHTGNSITVVDNGSGIPVGPHPTVQG
MDTLDVVMTKLHAGGKFESNAYKVSGGLHGVGVTCVNALSEWLKVEVYRDGKVWAQRYER
GNPAAKVSPIGETQRHGTKVSFKPDPTIFEVKEFSFETLSGRLRELAFLNAGLKITVEDE
RTGKRHEFHFKDGIREFVRYLNKSREALFDPPIALRQEIETERGAASVEIALQWNDGYDE
KVFAFANNIHNHEGGTHLVGFKAALTRTINAYGTKNNLFKDLKDDVPSGDDMREGLAAVI
SMRLPGASFEGQTKTKLSNTEAKSIVEQMLNDRLNAFLEENPPIAKRICAKVSEAARARI
AARKARETVRRKGALDGASLPGKLADCQSRDPAECEIFIVEGDSAGGSAKQGRDRRTQAI
LPLRGKILNVEKARFDKMLGSAEIATMITALGTGIGPEEFDPDKARYHKIVIMTDADVDG
AHIRTLLLTFFFRQMPELVEKGYLYVAQPPLYRVQKGKKENYLKDQEAMDEFLLSFATAK
SSLVAGEVTVEGSDLKKLAQDAIAYRALLDRADRRRDGRIVDAAIQVGDLDLALLKDHAA
LKQQADKIYEKAQKLHPELEVKAARIERDAEHDCDLLLFDTTVQGAPRETRLDFDYLSGP
EWTELSALHANVAELGAGPHLLKTDAGEEEVDDVFAAVEALKRAATSGQTIQRYKGLGEM
NPEQLWETTMDPAKRTLLQVRVDDTIDADEVFSVLMGDAVEPRREFIEKHALDVQNLDI
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcctgagcaaacgaccggtagcaccgccccccgtccggaggagctccccacg
cccgagcggtcgggcgccggcgcggacggcgccaccaacgggaacggcgactacggcacc
gacaccatcaaggtgctcgaggggctcgaggcggtccgcaagcggccgcacatgtacatc
ggcgacatcggcgagcgcgggctccaccacctcgtctacgaggtcgtggacaactcggtc
gacgaggcgatggccggccgctgcgacgagatcaacgtcaccatccacaccggcaactcc
atcacggtggtggacaacggctccggcatcccggtcggcccgcacccgaccgtgcagggc
atggacacgctcgacgtggtcatgaccaagctccacgccggcggcaagttcgagtcgaac
gcctacaaggtgtcgggcggtctccacggcgtcggcgtcacctgcgtgaacgccctctcc
gagtggctcaaggtcgaggtctaccgcgacggcaaggtctgggcgcagcgctacgagcgc
ggcaacccggccgccaaggtctcgcccatcggcgagacgcagcgccacggcaccaaggtc
tccttcaagcccgatccgaccatcttcgaggtgaaggagttcagcttcgagacgctctcc
gggcgcctccgcgagctcgccttcctcaacgccggcctcaagatcaccgtcgaggacgag
cgcaccggcaagcggcacgagttccacttcaaggacggcatccgcgagttcgtccgctac
ctcaacaagagccgcgaggcgctcttcgacccgcccatcgcgctgcgccaggagatcgag
accgagcgcggcgccgcctcggtcgagatcgcgctgcagtggaacgacggctacgacgag
aaggtcttcgccttcgccaacaacatccacaaccacgagggcggcacgcacctcgtcggc
ttcaaggcggcgctcacccgcaccatcaacgcctacgggaccaagaacaacctcttcaag
gacctgaaggacgacgtcccgtccggcgacgacatgcgcgaggggctggcggccgtcatc
tcgatgcgcctgccgggcgcgagcttcgaggggcagaccaagaccaagctctccaacacc
gaggcgaagagcatcgtcgagcagatgctcaacgaccggctcaacgccttcctcgaggag
aacccgcccatcgccaagcgcatctgcgccaaggtctccgaggcggcgcgcgcccgcatc
gccgcccgcaaggcccgcgagacggtgcgccgcaagggggccctcgacggcgcctcgctc
cccggcaagctcgccgactgccagtcccgcgacccggccgagtgcgagatcttcatcgtg
gagggcgactccgcaggcgggtccgccaagcaggggcgcgaccggcgcacccaggccatc
ctgccgctccgcggcaagatcctgaacgtggagaaggcgcgcttcgacaagatgctcggc
tcggccgagatcgcgaccatgatcaccgcgctcggcaccggcatcgggcccgaggagttc
gatcccgacaaggcgcgctaccacaagatcgtgatcatgaccgacgccgacgtggacggc
gcccacatccgcacgctgctcctcaccttcttcttccggcagatgccggagctggtggag
aagggctacctgtacgtggcccagccgccgctctaccgcgtgcagaaggggaagaaggag
aactacctcaaggaccaggaggcgatggacgagttcctcctctccttcgccaccgccaag
tcgtcgctcgtcgccggcgaggtgacggtcgaggggtccgacctcaagaagctggcgcag
gacgccatcgcctaccgcgccctcctcgaccgcgccgaccggcgccgcgacgggcgcatc
gtggacgccgccatccaggtgggcgacctcgacctggcgctgctcaaggaccacgccgcg
ctcaagcagcaggccgacaagatctacgagaaggcgcagaagctccacccggagctcgag
gtcaaggcggctcgcatcgagcgcgacgccgagcacgactgcgacctgctgctcttcgac
accaccgtgcagggcgcgccgcgcgagacccggctcgacttcgactacctctccggcccg
gagtggacggagctctccgcgctccacgccaacgtggccgagctcggggcggggccgcac
ctcctcaagaccgacgccggcgaggaggaggtggacgacgtcttcgccgcggtcgaggcg
ctcaagcgcgccgccacctccggccagaccatccagcgctacaaggggctcggcgagatg
aaccccgagcagctctgggagaccaccatggacccggccaagcggacgctgctccaggtc
cgcgtggacgacaccatcgacgccgacgaggtgttctcggtgctgatgggcgacgcggtg
gagccgcggcgcgagttcatcgagaagcacgccctcgacgtgcagaacctcgacatctag
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