Anaeromyxobacter paludicola: AMPC_29040
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Entry
AMPC_29040 CDS
T08525
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
apau
Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apau03009
]
AMPC_29040 (rimO)
Enzymes [BR:
apau01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AMPC_29040 (rimO)
Ribosome biogenesis [BR:
apau03009
]
Prokaryotic type
ribosomal protein modification factors
AMPC_29040 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
HDAC4_Gln
Motif
Other DBs
NCBI-ProteinID:
BDG09791
LinkDB
All DBs
Position
complement(3319173..3320588)
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AA seq
471 aa
AA seq
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MSTRVYMHTLGCPKNRVDSEVMLGTLSDAGYRLTQDPGEAEVIVVNTCGFIESAKEESIQ
AILAMAEQKREGRCKQLVVAGCLTQRYHAELSAEMPEVDHFVGTGAYADIARIVGDAQAK
RVIAPDPDFVHAASTPRVNSLPSHTAYLKISEGCDNACAFCIIPKLRGPQHSRPVDDVLA
EAEALAAQGTVELSLVAQDLTAYGYDLAGKVRLHDLLPELCKVDGIRWIRLHYAYPRDFP
DALIDVMAREEKIVKYLDMPLQHSSDRLLRSMRRGRDSQFMRDLLAKLRARVPGLALRTS
LIVGLPGETEEDFQDLLRFVEEQRFERLGVFEYSREEGTLAGEMEGQIPEAVKKARYATV
MERQQEIARAHQEGVVGRRLEVLVEGASEESEHLLAGRHAQQAPEIDGVTYVNDVADGGG
AVYPGQFVTLEVTEAGDYDLVGKVVARGPRPAERPLAARKAPKGSGLRILS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgcgtctacatgcacaccctcggctgccccaagaaccgggtggactccgag
gtgatgctcggcaccctctccgacgcgggctaccggctcacgcaggatccgggcgaggcc
gaggtcatcgtcgtcaacacctgcggcttcatcgagagcgccaaggaggagtcgatccag
gcgatcctcgccatggccgagcagaagcgcgaggggcgctgcaagcagctcgtcgtcgcc
ggctgcctcacccagcgctaccacgccgagctctccgccgagatgcccgaggtggaccac
ttcgtcggcaccggcgcctacgccgacatcgcccggatcgtcggcgacgcgcaggcgaag
cgcgtcatcgcgcccgaccccgacttcgtccacgccgcctccaccccgcgggtgaactcg
ctcccctcgcacaccgcctacctcaagatctccgagggctgcgacaacgcctgcgccttc
tgcatcatcccgaagctgcgcgggccgcagcactcgcggccggtggacgacgtcctggcc
gaggccgaggcgctcgccgcccagggcacggtggagctgtcgctcgtcgcccaggacctc
accgcctacggctacgacctggccggcaaggtgcggctgcacgacctcctgcccgagctc
tgcaaggtggacgggatccgctggatccggctccactacgcctacccccgcgacttcccc
gacgcgctcatcgacgtgatggcgcgcgaggagaagatcgtgaagtacctcgacatgccg
ctgcagcactcgagcgaccggctgctccggtcgatgcggcgcggccgcgactcgcagttc
atgcgcgacctcctcgcgaagctgcgcgcccgcgtccccgggctggcgctccgcacctcg
ctcatcgtcgggctccccggcgagaccgaggaggacttccaggatctcctccgcttcgtg
gaggagcagcgcttcgagcggctcggcgtcttcgagtactcgcgcgaggagggcacgctc
gccggggagatggagggccagatccccgaggcggtgaagaaggcgcggtacgccaccgtg
atggagcggcagcaggagatcgcccgcgcccaccaggagggcgtggtggggcggcggctc
gaggtgctggtggagggggcgagcgaggagtcggagcacctcctcgccggccgccacgcc
cagcaggcgccggagatcgacggggtgacctacgtgaacgacgtcgccgacggcggcggc
gcggtctaccccgggcagttcgtgaccctcgaggtgaccgaggccggcgactacgacctc
gtcggcaaggtggtggcgcgcgggccgaggccggcggagcggccgctcgcggcccgcaag
gcgccgaaggggagcgggctcaggatcctctcctga
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