Anaeromyxobacter paludicola: AMPC_29110
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Entry
AMPC_29110 CDS
T08525
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apau
Anaeromyxobacter paludicola
Pathway
apau03420
Nucleotide excision repair
apau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMPC_29110 (pcrA)
03430 Mismatch repair
AMPC_29110 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apau03400
]
AMPC_29110 (pcrA)
Enzymes [BR:
apau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMPC_29110 (pcrA)
DNA repair and recombination proteins [BR:
apau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMPC_29110 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AMPC_29110 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
HGTP_anticodon
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDG09798
LinkDB
All DBs
Position
3326922..3329291
Genome browser
AA seq
789 aa
AA seq
DB search
MSAPDLLQDLNDAQAAAVLHGDGPLLVLAGAGSGKTRVIVHRIAHLVTERRVMPWHVLAV
TFTNKAAGEMRERLEALLGPQARELWLSTFHAFGARFLRREAHRAGLPPDFAIYDDDDQL
RLVKSELAAAGMGDDDRMGPRAVLTRIDRWKSAGHLPGGVKVGDYDVEGQAALEIYRRYE
KQLARAGAVDFGDLLLRPLELLESDPDLLRYWSGRFRYLLVDEFQDTSAIQLELVKLLAG
AARNVCVVGDDDQAIYRWRGADVSNILDFDRTFPGTRVVKLEQNYRSTSRILEAAHAVIA
KAARRREKKLWTAQEGGAPLRLLVAQDEHEEGEKVARAAAGLRAEGVRLDEIAVLYRTNA
QSRPLEAAMRSARLPYVIVRGQSFYERAEVKDAAAYLRLALNPRSDLDLARVINRPARGI
GEKTVERLRAYAAVKELPLIEALGDRDAISELKPAARKALAAFHDLVLGLNRDIGGLDAG
VAVQEVLTRSEMIEKFRAEGSDEGVERVENLLELVAAAREFDEAHAGEPPPRDPEEQLPS
PVARFLEQLALLGDADAPTPEGRVALMTLHAAKGLEFDAVFMAGMEDGTLPYERPWSDDG
PAEVAAAQDEERRLCYVGMTRAKKLLTLSLARRRMGFGENGPSFRATEPSRFLGDLPPEL
FGLPARAPAAAPRPSGPVIRRHPGALPGEPVIELDEADGFQESRPPPRAAPPLRRPAAPR
GEPEIDYSYDQSQASGGGAPFPRGARVVHPSLGEGVVKSCDGAGAEAKVTVAFFGAGEKR
VLARFLRPG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccgacctgctccaggacctgaacgacgcccaggccgccgcggtgctgcac
ggcgacggccccctgctcgtcctcgccggggccggctccggcaagacccgcgtcatcgtg
caccgcatcgcccacctcgtcaccgagcggcgggtgatgccgtggcacgtgctcgcggtg
accttcaccaacaaggccgccggcgagatgcgcgagcggctcgaggcgctcctcgggccg
caggcgcgcgagctctggctcagcaccttccacgccttcggcgcccgcttcctgcggcgc
gaggcgcaccgcgccgggctcccgcccgacttcgccatctacgacgacgacgaccagctc
cgcctggtgaagtcggagctcgccgccgccggcatgggcgacgacgaccggatgggcccg
cgcgccgtcctcacccgcatcgaccgctggaagagcgccggccacctgccgggcggcgtg
aaggtgggcgactacgacgtggaggggcaggcggcgctcgagatctaccggcgctacgag
aagcagctcgcgcgggccggcgcggtggacttcggcgacctcctgctccggccgctcgag
ctcctcgagtccgaccccgacctcttgcgctactggtcgggccgcttccgctacctcctc
gtggacgagttccaggacacgagcgccatccagctcgagctggtgaagctcctcgccggg
gcggcgcggaacgtctgcgtggtgggcgacgacgaccaggccatctaccggtggcgcggc
gccgacgtctccaacatcctcgacttcgaccggaccttccccggcacgcgggtggtgaag
ctcgagcagaactaccgctccacgagccgcatcctcgaggccgcccacgccgtcatcgcc
aaggcggcgcggcggcgggagaagaagctctggaccgcgcaggaggggggcgcgccgctc
cggctcctcgtggcccaggacgagcacgaggagggcgagaaggtggcccgcgccgcggcc
ggcctgcgcgccgagggggtgcggctcgacgagatcgccgtcctctaccggaccaacgcc
cagtcgcgcccgctcgaggcggcgatgcggagcgcccgcctcccctacgtcatcgtccgg
ggccagagcttctacgagcgggccgaggtgaaggacgccgccgcctacctgcggctcgcg
ctcaacccgcgctccgacctcgacctcgcccgggtcatcaaccggccggcgcgcggcatc
ggcgagaagacggtggagcggctgcgggcctacgccgccgtgaaggagctcccgctcatc
gaggcgctcggcgaccgcgacgccatctccgagctgaagccggccgcccggaaggcgctc
gccgccttccacgacctcgtcctcgggctgaaccgcgacatcggcgggctcgacgccggc
gtggcggtgcaggaggtgctcacccgctccgagatgatcgagaagttccgggccgagggg
agcgacgagggggtggagcgggtggagaacctgctcgagctggtcgccgccgcgcgcgag
ttcgacgaggcccacgccggcgagcccccgccgcgcgacccggaggagcagctcccctcg
ccggtggcgcgcttcctcgagcagctcgcgctcctcggcgacgccgacgcccccacgccc
gaggggcgggtggcgctcatgacgctccacgccgccaaggggctcgagttcgacgcggtc
ttcatggcgggcatggaggacggcacgctgccgtacgagcggccctggtccgacgacggc
ccggcggaggtggccgccgcgcaggacgaggagcggcggctctgctacgtcggcatgacg
cgggcgaagaagctcctcaccctgtcgctggcgcgccggcgcatggggttcggcgagaac
ggcccgagcttccgcgccaccgagccctcgcgcttcctgggcgatctcccgcccgagctc
ttcggcctccccgcgcgcgcccccgccgccgcgccgcgcccgtcggggccggtcatccgc
cgccacccgggcgcgctccccggcgagccggtcatcgagctcgacgaggccgacgggttc
caggagtcccgcccgccgccccgcgccgcgcccccgctccgccgccccgccgcgccccgg
ggcgagccggagatcgactactcctacgaccagtcgcaggcctccggcggcggcgccccg
ttcccgcgcggcgcccgggtggtgcacccgtcgctcggcgagggcgtggtgaagtcctgc
gacggcgcgggcgcggaggccaaggtgacggtggcgttcttcggggccggcgagaagcgg
gtgctggcgcggttcctcaggcccgggtag
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integrated database retrieval system
