KEGG   Anaeromyxobacter paludicola: AMPC_34060
Entry
AMPC_34060        CDS       T08525                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
apau  Anaeromyxobacter paludicola
Brite
KEGG Orthology (KO) [BR:apau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apau03400]
    AMPC_34060
Enzymes [BR:apau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMPC_34060
    5.6.2.6  RNA 3'-5' helicase
     AMPC_34060
DNA repair and recombination proteins [BR:apau03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AMPC_34060
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C WH3_Lhr ResIII AAA_25 Cas3-like_C_2 DUF6406
Other DBs
NCBI-ProteinID: BDG10293
LinkDB
Position
3892557..3897083
AA seq 1508 aa
MASGDAPSLFHPAVAEWFARSFPAPTRAQSLSWPPIRRGESTLLLAPTGSGKTLAAFLSC
LDRLMFSPEPPKRERLKVLYVSPLKALAVDVERNLRAPLAGIARVAAARGDPHRIPEVGV
RTGDTPARERARFRRAPSDVLITTPESLYLLLTSQAREALRTVELVIVDEIHALVPGKRG
AHLALSLERLEALCGRRLQRVGLSATQRPLEEVARFLGGAEAPGEGGAPPRWRPVTVVDA
GSRKPLELTVEVPVEDMARLGAPLDLPGGSAAAGPARASIWTAIHPRLLALVRAHRTTLV
FVNSRRVAERLAAALNELAGEVLVHAHHGSIARPQRVQIESELKAGRVRGLVATSSLELG
IDMGSVDLVVQIEAPPSVASGLQRIGRAGHQVDAPSVGVVFPKYRADLVACAAVVAAMRE
GAVEAIRFPRNPLDVLAQQIVAMVSFEDQPVEALFATVRRAAGFAELPRSVFDGVLDMLS
GRYPSEQFSELRPRLTWDRAAGALRAREGARRIAVANGGTIPDRGLYGVFLAGGEKGQAR
IGELDEEMVFESREGETFVLGASTWRIEEITHDRVLVSPAPGEPGKMPFWHGDAAGRPLE
LGRRIGRLTRELRALPRAAALERLGREHALDPRAAENLLRFLDDQAAAVGAVPDDRTVVV
ERFRDELGDWRVCVLTPFGGRVLAPWALAASARARSILGVEAETLWTDDGFAVRLPDLEA
APDPAFLLPEPEEVQDLVSRELGGTALFAGRFREVAARALLLPRRRPGGRTPLWQQRKRA
GDLLAVAAGYPAFPMLLETWRECLQDLFDLPALAELLGQVRSRQVRVVTADPAAPSPFAA
SVLFGFMASFIYDGDAPLAERRAQALAIDQAQLRELLGEAELRELLDEAALAQVEARLQL
LEPELRARSADGVADLLLRLGDLSRAELERRCASPAVAAEVERLVREGRALPVRVAGEAR
YIAVEDAARYRDALGTPLPPLVPAPFLEPAPDALGELCARFARRHAPFASSALAARFGLG
VAVAEAALERLAAKGRVLEGAFRPHGAGREWCDPEVLRAVRRRSLSRLRAEIEPAEPAAL
SRALLSWQGVLRPARAGPDAILDAVEKLQGAPLPASLLETELLPARVEGYRRGDLDALAA
AGEVRWVGVEPIGERDGRVALYLADALPRLLPPLRADAAAPPAGREAAILAALALRGASF
FPELHAAAGGGYEGQTVDALWGLVWRGLVTNDGFGPLRAYAEQGAVRRERARLEARAPFR
SRRAAPPAAGGRWTLIEPRRPGATGPGPTAWSAGMAQQLLLRYGLVTREVAQLEGLPGGF
GAVYEVLRRLEEAGRIRRGYFVAGVGAMQFAQPGALDLLRSLRQPGEEPEVVTLSAADPA
SPWGGLLAWPESASGRRPARAAGARVVLVDGALAAWVARGGRQLLAFLPELEPDRSRVGA
AVASTLAAAARAALARREATLLAEIDGRPAGEHPLAAWLVAAGFQPSPAGLQFTWRSPAA
RAPSAPVH
NT seq 4527 nt   +upstreamnt  +downstreamnt
atggcctcgggcgacgccccatcgctcttccaccccgccgtcgcggagtggttcgcgcgc
tcgttccccgcgccgacgcgggcgcagtccctctcctggccccccatccgccgcggcgag
agcacgctgctcctcgcgccgaccggcagcggcaagaccctcgcggccttcctctcctgc
ctcgaccggctgatgttctcccccgagccgccgaagcgcgagcggctcaaggtgctctac
gtgtcgccgctcaaggcgctggccgtggacgtggagcggaacctgcgcgccccgctggcc
ggcatcgcccgggtggcggccgcgcgcggcgatccgcaccggatccccgaggtcggggtc
cgcaccggggacacgccggcccgggagcgggccaggttccggcgcgccccctccgacgtc
ctcatcaccacgccggagtcgctctacctcctgctcacctcgcaggcccgcgaggcgctc
cggacggtggagctcgtcatcgtggacgagatccacgcgctcgtgccgggcaagcgcggc
gcccacctcgccctctcgctcgagcggctcgaggcgctctgcggccggcggctgcagcgg
gtggggctctcggcgacgcagcggccgctcgaggaggtggcccgcttcctcggcggggcc
gaggcgccgggggaggggggcgccccgccgcgctggcggccggtcacggtggtggacgcc
gggtcgcgcaagccgctcgagctcacggtcgaggtgccggtcgaggacatggcgcggctc
ggcgcgccgctcgacctccccggcggctcggccgcggccgggccggcgcgggcctcgatc
tggaccgccatccacccgcggctgctcgcgctcgtgcgcgcccaccggaccacgctcgtc
ttcgtgaacagccggcgcgtggccgagcggctcgccgcggccctgaacgagctcgccggc
gaggtcctggtccacgcccaccacggctcgatcgcgcggccgcagcgggtccagatcgag
agcgagctcaaggcggggcgggtgcgcgggctcgtcgccacctcctcgctcgagctcggc
atcgacatggggtcggtggacctggtggtccagatcgaggcgccgccgtcggtggcgagc
gggctgcagcggatcggccgcgccggccaccaggtggacgcgccgagcgtcggggtggtc
ttccccaagtaccgggccgacctcgtggcctgcgcggcggtggtggcggcgatgcgcgag
ggggcggtggaggccatccggttcccgcgcaacccgctcgacgtgctcgcgcagcagatc
gtggcgatggtctcgttcgaggaccagccggtggaggcgctcttcgccaccgtccgccgc
gccgccggcttcgccgagctcccccggagcgtcttcgacggcgtgctcgacatgctctcg
ggccgctacccctcggagcagttctccgagctccggccgcggctcacctgggaccgggcc
gccggcgcgctgcgggcgcgcgagggggcgcggcgcatcgcggtcgcgaacggcggcacc
atccccgaccgcgggctctacggcgtgttcctggccggcggagagaaggggcaggcccgg
atcggcgagctcgacgaggagatggtcttcgagtcgcgggagggcgagaccttcgtcctc
ggcgcctccacctggcgcatcgaggagatcacgcacgaccgggtgctcgtctcgcccgcg
cccggcgagccggggaagatgcccttctggcacggcgacgccgcggggcggccgctcgag
ctggggcggcgcatcggccgcctcacccgcgagctgcgcgccctgccgcgcgccgcggcg
ctggagcggctcggccgcgagcacgccctcgacccgcgggccgccgagaacctgctccgc
ttcctcgacgaccaggcggcggcggtgggcgcggtgccggacgaccggacggtggtggtg
gagcggttccgcgacgagctcggcgactggcgcgtgtgcgtcctcacgcccttcggcggg
cgggtgctcgcgccctgggccctggcggcgtcggcgcgcgcccgctccatcctcggggtg
gaggcggagacgctctggaccgacgacggcttcgcggtgcggctccccgatctcgaggcg
gccccggacccggccttcctcctgccggagccggaggaggtgcaggacctcgtctcgcgc
gagctcggcggcaccgccctcttcgccggccgcttccgcgaggtggcggcgcgggcgctg
ctcctgccccggcgccgccccggcggccgcaccccgctctggcagcagcgcaagcgcgcc
ggcgacctgctcgcggtggccgccggctacccggccttccccatgctgctcgagacctgg
cgcgagtgcctgcaggacctcttcgacctcccggcgctggcggagctgctcggccaggtg
cggtcgcggcaggtgcgcgtcgtcaccgccgacccggccgcgccgtcgccgttcgccgcc
tcggtcctgttcggcttcatggcgagcttcatctacgacggcgacgccccgctcgccgag
cgccgggcccaggccctcgccatcgaccaggcccagctccgggagctgctgggcgaggcg
gaactgcgcgagctcctcgacgaggccgcgctggcgcaggtggaggcgcggctgcagctc
ctcgagccggagctgcgggcgaggagcgccgacggggtggccgacctgctgctccggctc
ggcgacctctcgcgcgccgagctcgagcggcgctgcgccagccccgcggtggcggccgag
gtggagcggctggtgcgcgaggggcgcgccctgccggtgcgggtggcgggcgaggcgcgc
tacatcgcggtggaggacgcggcccgctaccgcgacgcgctcgggacgccgctcccgccc
ctcgtgccggcgccgttcctggagccggcgccggacgcgctgggcgagctctgcgcccgc
ttcgcgcgccgccacgcgccgttcgcgtcgagcgcgctcgcggcccgcttcggcctcggc
gtggcggtggccgaggcggcgctggagcggctcgccgcgaaggggcgggtgctcgagggc
gccttccggccgcacggggccgggcgcgagtggtgcgacccggaggtgctgcgggcggtg
cggcgccgctccctctcccggctgcgggccgagatcgagccggccgagccggcggctctc
tcccgcgcgctcctctcctggcagggggtgctgcgccccgcgcgcgccggcccggacgcg
atcctcgacgcggtggagaagctgcagggcgcgccgctcccggcgtcgctcctcgagacc
gagctcctgccggcgcgcgtcgaggggtaccggcgcggcgacctcgacgcgctcgcggcc
gcgggcgaggtgcgctgggtgggcgtcgagcccatcggcgagcgcgacggccgggtggcg
ctctacctcgcggacgcgctgccgcggctcctgccgcccctgcgcgccgacgccgccgcg
ccgcccgccgggcgcgaggcggccatcctcgccgcgctcgccctgcgcggggcgtccttc
ttcccggagctgcacgcggcggcgggcggcggctacgaggggcagacggtggacgcgctc
tgggggctcgtctggcgcgggctcgtgaccaacgacggcttcgggccgctgcgcgcctac
gcggagcagggggcggtgcggcgcgagcgggcccggctcgaggcgcgcgctcccttccgc
tcccgacgggcggcgccgcccgcggcgggcgggcgctggacgctgatcgagccgcggcgg
ccgggcgcgaccggaccgggcccgaccgcctggagcgccgggatggcccagcagctcctc
ctccgctacggcctcgtcacccgcgaggtggcgcagctcgaggggctgcccggcggcttc
ggcgccgtctacgaggtgctgcggcggctcgaggaggcgggccggatccggcgcggctac
ttcgtcgccggggtgggcgccatgcagttcgcgcagccgggcgcgctcgacctgctccgc
tcgctccggcagccgggggaggagccggaggtggtgacgctctccgccgccgacccggcg
agcccgtggggcgggctcctcgcctggccggagagcgcgtcgggccgccggccggcgcgg
gcggccggggcgagggtggtgctggtggacggggcgctcgccgcctgggtggcgcgcggc
ggccggcagctcctcgccttcctgcccgagctcgagcccgaccgctcgcgggtgggcgcc
gcggtggcgtccacgctggcggcggcggcgcgggcggcgctggcccgccgcgaggccacg
ctcctcgccgagatcgacggccggcccgcgggggagcacccgctcgcggcctggctcgtg
gccgccggcttccagccctctccggccgggctgcagttcacctggcggagcccggcggcg
cgggcgccctccgcgccggtgcactga

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