Anaeromyxobacter paludicola: AMPC_35350
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Entry
AMPC_35350 CDS
T08525
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
apau
Anaeromyxobacter paludicola
Pathway
apau03030
DNA replication
apau03430
Mismatch repair
apau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMPC_35350
03430 Mismatch repair
AMPC_35350
03440 Homologous recombination
AMPC_35350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apau03032
]
AMPC_35350
03400 DNA repair and recombination proteins [BR:
apau03400
]
AMPC_35350
Enzymes [BR:
apau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMPC_35350
DNA replication proteins [BR:
apau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMPC_35350
DNA repair and recombination proteins [BR:
apau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMPC_35350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_16
AAA_2
ResIII
AAA_14
AAA_19
Rad17
AAA_18
TsaE
AAA_24
RCF1-5-like_lid
LysC
Mg_chelatase
DUF815
G-gamma
nSTAND3
PIF1
Motif
Other DBs
NCBI-ProteinID:
BDG10422
UniProt:
A0ABM7XF21
LinkDB
All DBs
Position
4050926..4052767
Genome browser
AA seq
613 aa
AA seq
DB search
MGYLVLARKYRPQSFGEMAGQEHVVRTLANALKSGQLAHAFLFTGPRGVGKTTSARLVAK
ALNCQKGPTATPCGECPPCVEIAEGRCVDVVEIDAASNNGVDNVRDIIEAVKYRPARDRY
KVFVVDEVHMLSTGAFNALLKTLEEPPEHVKFVLATTDVHKVPETIVSRCQRFDFRRLTQ
QQIVDQLRKVAEAEGMRVSDAALALVARAAEGGMRDALSSLDRVRAACGDDTSDAAVAEA
VGAVDAAAVARLGRALVTRDGAALLAEIEALHGRGQEMRRVAEELARHLRDVVVARLVPQ
APLDLTDHERAEVVAQGQAAEPAQLTRLFDIAQRAISEVKLSDQPRHALEVALLKAAYLA
PGQEVGELVARLESLAAGAPLPPRPPGAGGPGSGGPGAPRSAAPAQAAPAPSFHSQRAEA
PAPAAPARAGDAAAPAGFSPIASFGTPGCAGGAAPAVVAPAAPAAPGPCDDPSAPPAERW
RAAVESMERQSPFVAQALKHAALLGIEADAISLSLPRGSTMAAAAERKRPEAEASLSRFF
GRAMKLVLSLGDAPPPAAAAAGPAPGAPTSIFAAEKAERAALHAKREAEARGHPNIQDAV
RILDGEIHRVDDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctcgtcctcgcccgcaagtaccgcccccagagcttcggagagatggccggc
caggagcacgtggtccggacgctcgcgaacgcgctcaagagcggtcagctcgcccacgcc
ttcctcttcaccggcccgcgcggggtgggcaagaccaccagcgcccgcctggtcgcgaag
gcgctcaactgccagaaggggcccacggccacgccgtgcggcgagtgcccgccctgcgtc
gagatcgccgaggggcgctgcgtggacgtggtggagatcgacgccgcctccaacaacggc
gtggacaacgtccgcgacatcatcgaggcggtgaagtaccggccggcccgcgaccgctac
aaggtcttcgtggtcgacgaggtccacatgctctcgacgggcgcgttcaacgcgctcctc
aagacgctggaggagccgcccgagcacgtgaagttcgtgctcgccaccaccgacgtccac
aaggtccccgagaccatcgtctcgcgctgccagcgcttcgacttccgccggctcacccag
cagcagatcgtcgatcagctgcgcaaggtggccgaggcggaggggatgcgcgtctccgac
gccgcgctcgcgctcgtggcccgcgccgccgagggcggcatgcgcgacgcgctctcctcg
ctcgaccgggtccgcgccgcctgcggcgacgacacctccgacgccgccgtggccgaggcg
gtcggggcggtggacgcggcggcggtggcccggctcggccgcgccctcgtcacccgtgac
ggcgccgcgctcctcgccgagattgaggccctccacggccgcggccaggagatgcgccgg
gtggccgaggagctcgcccgccacctgcgcgacgtggtggtggcccggctcgtgccgcag
gcgccgctcgacctcaccgaccacgagcgggccgaggtggtggcgcaggggcaggccgcc
gagccggcgcagctcacccgcctcttcgacatcgcccagcgcgccatctccgaggtgaag
ctctccgaccagccgcgccacgcgctcgaggtggcgctgctcaaggcggcctacctcgcc
cccgggcaggaggtgggcgagctcgtcgcccggctcgagtcgctcgccgcgggcgcgccc
ctcccgccgcgcccgcccggcgccggtggccccggctccggcgggccgggggcgccgcgc
tccgccgcgccggcgcaggccgccccggcgccctcgttccactcccagcgcgccgaggcg
ccggcccccgccgccccggcccgggccggggacgccgccgcccccgcgggcttctcgccc
atcgcgtccttcgggacgcccggctgcgccggcggggccgcgccggcggtggtcgcgccc
gcggcgcccgccgcccccggcccgtgcgacgacccctccgccccgccggccgagcgctgg
cgcgccgcggtcgagtcgatggagcgccagagccccttcgtcgcccaggcgctcaagcac
gccgccctgctcggcatcgaggccgacgcgatctccctctccctgccgcggggctccacc
atggccgccgccgccgagcggaagcggccggaggcggaggcgtcgctgtcgcgcttcttc
gggcgcgccatgaagctcgtcctctccctcggcgacgcgccgccgcccgccgcggcggcc
gccggcccggcgccgggcgcgccgacctccatcttcgccgccgagaaggcggagcgggcc
gccctccacgcgaagcgcgaggcagaggcccgcggccaccccaacatccaggacgcggtc
cggatcctcgacggcgagatccaccgcgtcgacgacctctag
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