Candidatus Puniceispirillum marinum: SAR116_0083
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Entry
SAR116_0083 CDS
T01207
Name
(GenBank) Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00630
Glyoxylate and dicarboxylate metabolism
apb00680
Methane metabolism
apb01100
Metabolic pathways
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAR116_0083
09102 Energy metabolism
00680 Methane metabolism
SAR116_0083
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SAR116_0083
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
2Fe-2S_thioredx
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
ADE38326
UniProt:
D5BNQ9
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All DBs
Position
complement(89188..90906)
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AA seq
572 aa
AA seq
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MDNLPNTGRDKSDDFSSAGTPSRGKGRYKPKGRMLDPVALDEVRALLGNISPTRDMLIEY
LHMIQDSEKHLSARHLAALAHIMRIPMAEVWEVASFYDHFDLVKEDETAPPLCTVRVCTS
LSCMMAGGETMLEKLQPYASDKVRFVPAPCIGACDKAPAAAVGHKLVEHASFEALKAVEE
DGHPEIPATARRFDDYVADGGYSLLKALLAGEKTAEDVLSVLDNTALRGLGGAGFPTGRK
WRIVSGQPGPRLMAVNGDEGEPGTFKDRLYLSNDPHRMIEGILIATKVVGIDACYIYMRD
EYPEIIALLKEELAAVEAAGLTDHTELHLRRGAGAYICGEESAMIESIEGKRGLPRHRPP
FVAEKGIFDRPTLVNNVETLYWIRDIVEQGADWFNNQGKDGHPGPRSYSVSGRVAKPGVI
VAPAGSTVEELIALCGGMADGHSFKGYLPGGASGGILPASKSDIPLDFGGKLAEEGCFVG
SHAVVVLSDQDNMWDAATNLLKFFAHESCGQCTPCRNGTEKAVTLMQSANPDVNLLGELS
IAMGDASICGLGQAASNPLTSVMKHFPEDIVK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtggataatttaccgaacaccggtcgcgataagtcagacgattttagcagcgctggcaca
cccagccgcggcaaaggaagatacaaaccaaaaggtcgtatgcttgaccctgttgcgctt
gacgaagtgcgcgcgctactgggtaatatcagccccacccgtgatatgctgattgaatat
ctgcacatgatacaagatagtgaaaaacacctatctgcacggcatctggcagcgcttgcc
catatcatgcgcattccgatggccgaagtctgggaagttgccagcttctatgaccatttt
gatcttgttaaagaagatgaaacagccccaccgctttgtaccgttcgcgtttgcacgtca
ctttcctgcatgatggctggcggtgaaaccatgcttgaaaagttacaaccctatgccagt
gacaaggtgcgttttgttcctgcgccttgcattggcgcttgtgacaaggcgcctgccgcc
gcggttggtcacaaacttgtcgaacatgccagctttgaagcgctgaaagccgttgaagaa
gacggacatccggaaattccggcaaccgcacgccgttttgatgattatgtcgccgatggt
ggttatagcctgctcaaagctttgctggcaggcgagaaaaccgccgaagatgttttgtcc
gttctggataacacagctttacgtggtcttggcggtgcggggttcccgactggacgtaaa
tggcgcattgtttcaggccagcccggaccacgcctgatggcagtcaatggtgatgagggc
gaaccgggcacctttaaggaccgcctatatttatcaaatgacccccaccgtatgattgaa
ggcattctgatcgcaaccaaggttgtgggcatcgatgcttgttacatctatatgcgtgat
gaatacccagaaatcattgccttgctaaaagaagagctggcggctgtcgaagcggcaggc
ttaaccgatcataccgagttgcatctgcgccgcggtgctggtgcctatatttgcggcgaa
gagtcagccatgatcgagtcgatcgagggtaaacgcggcctgccgcgtcaccgcccgccc
tttgtcgctgaaaaaggcatctttgaccgcccgacgctggtcaataatgtcgaaacgcta
tactggattcgtgacattgtcgaacaaggtgccgactggttcaacaatcagggcaaagac
ggacatcccgggccacgcagctattcggtttctggccgtgttgccaagcctggtgtgatc
gtggctcctgccggttcgactgttgaagaattgattgccctatgcggcggcatggctgat
ggacatagcttcaaaggctatctccctggcggtgcctccggtggtattctgcccgcaagc
aaaagtgatattccgcttgattttggtggcaaacttgccgaggaaggctgttttgtaggc
tcgcatgcagtcgtcgtattatccgatcaggataatatgtgggacgccgcgacaaatctg
ttaaaattctttgcgcatgaaagctgcgggcaatgcaccccatgccggaatggcaccgaa
aaggcagtgacattgatgcaaagcgcaaatcctgatgtcaatctattgggcgaattatcg
attgccatgggtgatgccagcatttgcggccttggtcaggcggcatccaatcctctgacc
agcgtgatgaagcattttcctgaagatattgtaaaataa
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