KEGG   Candidatus Puniceispirillum marinum: SAR116_0103
Entry
SAR116_0103       CDS       T01207                                 
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
apb  Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:apb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apb03032]
    SAR116_0103
   03036 Chromosome and associated proteins [BR:apb03036]
    SAR116_0103
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:apb02048]
    SAR116_0103
Enzymes [BR:apb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SAR116_0103
DNA replication proteins [BR:apb03032]
 Prokaryotic type
  DNA Topoisomerases
   SAR116_0103
Chromosome and associated proteins [BR:apb03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SAR116_0103
Prokaryotic defense system [BR:apb02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    SAR116_0103
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: ADE38346
UniProt: D5BNS9
LinkDB
Position
complement(112002..113990)
AA seq 662 aa
MNMSDLFGNAASDDNYDASNIEVLEGLEPVRHRPGMYIGGTDERAYHHLAAEILDNSMDE
AVAGHANRIDFHLESATTLSIRDNGRGMPTGNHPKFPDKSAVEVIMTTLHAGGKFSGKSY
ATSGGLHGVGASVVNALSSALLVEIARDKKLYQQSFSRGKPLDALTEIGGAPNRRGTTVT
FTPDTEIFGEKAHFRPSTLYRMARSKAYLFAGVEIRWQCDPALLADNDPVPAEAVLHYPG
GLADYLNDVTRDKALMVSTPFAEIAELDGQKFEWAITWLGAGEDGFFHSYCNTVPTPSGG
THETGFRQAIVRALRNYGDLAGNRKAADLTADDVLANTGVMLSVFLRDPQFQGQTKDRLV
STDATRMTEQAVRDRFEHWLSADSARANFLLEAAIERAEERKRRKKEKEVARKSATRRLR
LPGKLADCTSNDLDLTELFLVEGDSAGGSAKQARNRKTQAVLPLRGKILNVASATVEKLS
GNQELSDLALALGVRPGKDFKVDDLRYGRVVIMTDADVDGAHIAALLMTYFYREMPQLIE
AGRLYLAQPPLYRINQGGKTLYALDDAQRDTLLETGFDKRGKIDISRFKGLGEMPPAQLK
ETTMNPASRRLLKVELPQRDSIGADLRRTTDQLVNTLMGKKAELRFGYIRDHAEDALANL
DV
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgaatatgtctgacctgtttggcaatgcggcatccgatgacaattacgatgcgtcgaat
attgaggtgcttgaagggctggagcctgtgcgccaccggccgggcatgtatattggcggc
accgacgagcgcgcctatcatcatctggcggctgaaattctcgataattcgatggatgag
gcagtcgcggggcatgccaaccgcattgattttcatctcgaatctgccacgaccttgtcg
atccgcgataatggccgcggcatgccaacgggtaatcatcccaaatttcccgacaaatcc
gctgttgaggtgattatgacaaccttgcatgcggggggtaagttttccggcaaatcctat
gcaacatctggtggtctgcatggggttggcgcgtcggtggtgaatgcgctatcaagcgcg
ctgttggttgaaatcgcccgcgacaaaaagctgtatcagcaatcattttcacgcggcaag
cctttggacgcgttgaccgaaatcggcggcgcaccaaaccgtcgcggcaccacggtgacc
tttacgcctgacactgaaatctttggggaaaaggcgcatttccgcccgtccaccttatac
cggatggcgcggtcaaaggcctatttgtttgctggcgtcgaaatcagatggcaatgcgat
ccggccttattggcggataatgatccggtgccagccgaagctgtgctgcattatccgggc
ggacttgccgattatctgaatgatgtgacccgcgacaaggcattgatggtttcaacgcct
tttgccgaaattgccgagcttgacgggcagaaattcgaatgggcgatcacttggcttggt
gccggcgaagatggttttttccattcctattgtaacacggtgccaacgccatcgggcggc
acgcatgaaaccggctttcgtcaggcgatcgtgcgtgccttgcgtaattatggtgatctg
gcgggcaaccgcaaagcggctgacctgaccgccgatgatgtgctggccaataccggcgtc
atgctgtcggtatttttgcgcgatccgcagtttcagggccagaccaaagaccggcttgtg
tcaaccgatgctacccgcatgaccgaacaggcggtgcgcgatcgctttgaacattggcta
tctgccgactcggcacgcgccaattttctgctagaggccgctattgaacgcgccgaagaa
cgcaagcggcgcaaaaaggaaaaggaagtggcgcgtaaatcggcaacacgccgtctgcgc
ctgccaggcaagctggctgactgcacttcaaacgatcttgatctgaccgaattattcctt
gtcgagggggactcggcgggcggttcggcaaaacaggcccgtaatcgtaaaacgcaggcc
gttttgcctctacgcggcaagattttgaatgtcgccagcgcaacggttgaaaaactcagc
ggcaatcaggaactatccgatctggcgttggcgcttggcgtgcgcccaggcaaggacttc
aaagtcgatgatctacgctatgggcgtgttgtcatcatgacagatgccgatgtcgatggc
gcccatattgctgccttgctgatgacctatttctatcgtgaaatgccccaattgatcgaa
gcaggtcggctctatcttgcccagcccccgctttatcgtattaatcagggtggcaaaacg
ctttatgcgctggatgatgcccagcgagacacattgttggaaactggttttgacaaacgc
ggcaaaatcgatatcagccgctttaagggacttggtgaaatgcccccagcccagctcaag
gaaaccaccatgaatccggcaagtcgtcgcctgctaaaggttgaattgccacaacgtgac
agcattggcgctgatctgcgacgcaccaccgatcagctggtcaatacgcttatgggcaaa
aaggctgaactgcgttttggctatatccgcgatcatgccgaagatgcactagccaatctg
gacgtttaa

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