Candidatus Puniceispirillum marinum: SAR116_0125
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Entry
SAR116_0125 CDS
T01207
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apb03032
]
SAR116_0125
03036 Chromosome and associated proteins [BR:
apb03036
]
SAR116_0125
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0125
DNA replication proteins [BR:
apb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAR116_0125
Chromosome and associated proteins [BR:
apb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAR116_0125
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAR116_0125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ADE38368
UniProt:
D5BP86
LinkDB
All DBs
Position
138573..138848
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNDLVSEVAESSGLTKADAGRAVDAVFESIQGALKSGGDVRIVGFGTFSVAHRAATTG
RNPRTGETIQIKASKQPKFKAGAPLKEAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatgatcttgtttctgaggttgcagagtcatctggtttgacaaaagctgac
gcgggtcgcgcagttgatgctgtttttgaaagcatccaaggcgcattgaaatcaggtggc
gacgtaagaattgttggatttggtactttttctgtcgcgcatcgcgctgccacaactggc
cgtaacccaagaacgggtgagaccatccaaattaaagcatcaaagcaacccaagtttaaa
gcgggtgctcctttgaaagaagccgttaacagctaa
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