Candidatus Puniceispirillum marinum: SAR116_0161
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Entry
SAR116_0161 CDS
T01207
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00260
Glycine, serine and threonine metabolism
apb00460
Cyanoamino acid metabolism
apb00630
Glyoxylate and dicarboxylate metabolism
apb00670
One carbon pool by folate
apb00680
Methane metabolism
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
apb01230
Biosynthesis of amino acids
apb01240
Biosynthesis of cofactors
apb04981
Folate transport and metabolism
Module
apb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAR116_0161
09102 Energy metabolism
00680 Methane metabolism
SAR116_0161
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAR116_0161
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAR116_0161
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAR116_0161
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAR116_0161
Enzymes [BR:
apb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAR116_0161
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADE38404
UniProt:
D5BPC2
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All DBs
Position
168738..170042
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AA seq
434 aa
AA seq
DB search
MDDLKRTIPSFVMDGFFSAPLKDTDPEVAAALGHELVRQQDQIEMIASENIVSTAVMEAQ
GSIFTNKYAEGYSGRRYYGGCEYMDVVETLAIERAKTLFKCNFVNVQPHSGAQANQAVFL
SLLKPGDTILGMSLAAGGHLTHGAAPNLSGKWFNAVQYGVDPETSLIDFDELQKIAEECK
PQMILAGGSAYPRTLDFAKFREIADSVGAYLMVDMAHISGLVATGAHPSPVPHAHVVTST
THKTLRASRGGIILSNDEALGKKINSAVFPGLQGGPLMHAIAGKAVAFGEAMRPEFKQYI
DSVVENARVLSETLIERGAAIVSGGTDTHLTLVDLRPKGLTGDITEVSLEHAGITCNKNG
IPFDPQPPMVTSGVRLGTPAGTTRGFARDEFVEIGHLIGDVFDGLAENPEDNSAVEAVVR
EKVRRLCRAFPIYQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttaaaaagaacgataccatcattcgtaatggacggatttttctcagcacca
ttaaaggataccgatcctgaggtagcggcagcattagggcatgaacttgtgcgccagcag
gatcagatcgaaatgatcgcatccgaaaacattgtcagcacggcagtcatggaagcacag
ggatcgatttttaccaataaatatgccgaaggctattcaggtcgtcgttattatggtggc
tgtgagtatatggacgttgtcgagacgttagcgattgaacgcgccaagacgctgtttaaa
tgtaactttgtaaatgtgcagccgcattctggcgcgcaggctaaccaggctgtgttcctg
agcttgttgaagccgggcgatacgattctgggtatgtcattggctgcaggtggccacctt
acgcatggtgcggcaccaaacctgtctggtaaatggtttaatgccgtgcaatatggcgtt
gatccagaaacctcattaattgactttgatgagttgcagaaaattgccgaagagtgcaag
ccgcagatgattctggctggtggttcggcttatcctagaacgctcgattttgccaaattc
cgtgaaattgctgattcggttggtgcctatctgatggtcgatatggcgcatatttccggt
ctggtagccaccggtgcgcatcctagtccagttccccatgcgcatgtcgtgacctcaaca
acgcataagacattacgtgcatcgcgtggaggtatcatcctgtcgaatgacgaagcgctg
ggcaagaagatcaattcagctgtttttccggggcttcagggtggtccgttgatgcatgcg
attgctggtaaagcggttgcttttggcgaagcgatgcggccagagttcaagcaatatatc
gactctgttgttgaaaatgctcgtgtgctttccgaaacactgatcgaacgtggcgcggcg
attgtctctggtggtactgacacacatctgacgctggtcgatttacgtccaaaaggtctg
acaggcgatatcactgaagtgtcgcttgaacatgctggcatcacatgcaacaaaaatggt
attccgtttgatccgcaaccacctatggtgacttcgggtgtccgtctgggcacgccagca
ggcacaacacgcggctttgcgcgtgatgagtttgtcgaaatcggtcatctgatcggtgat
gtgtttgatggcttggcagaaaatccggaagataatagtgctgttgaggctgtcgtacgt
gaaaaagtgcgcagactatgtcgggctttcccaatctatcaatag
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