Candidatus Puniceispirillum marinum: SAR116_0208
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Entry
SAR116_0208 CDS
T01207
Name
(GenBank) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzyme
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00010
Glycolysis / Gluconeogenesis
apb00020
Citrate cycle (TCA cycle)
apb00260
Glycine, serine and threonine metabolism
apb00280
Valine, leucine and isoleucine degradation
apb00310
Lysine degradation
apb00380
Tryptophan metabolism
apb00620
Pyruvate metabolism
apb00630
Glyoxylate and dicarboxylate metabolism
apb00640
Propanoate metabolism
apb00670
One carbon pool by folate
apb00785
Lipoic acid metabolism
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
apb01210
2-Oxocarboxylic acid metabolism
apb01240
Biosynthesis of cofactors
Module
apb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
apb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
apb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
apb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SAR116_0208
00020 Citrate cycle (TCA cycle)
SAR116_0208
00620 Pyruvate metabolism
SAR116_0208
00630 Glyoxylate and dicarboxylate metabolism
SAR116_0208
00640 Propanoate metabolism
SAR116_0208
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAR116_0208
00280 Valine, leucine and isoleucine degradation
SAR116_0208
00310 Lysine degradation
SAR116_0208
00380 Tryptophan metabolism
SAR116_0208
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAR116_0208
00670 One carbon pool by folate
SAR116_0208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apb04147
]
SAR116_0208
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SAR116_0208
Exosome [BR:
apb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SAR116_0208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
Pyr_redox_3
NAD_binding_8
DAO
HI0933_like
FAD_oxidored
FAD_binding_2
FAD_binding_3
Lycopene_cycl
Thi4
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_9
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
ADE38451
UniProt:
D5BPG9
LinkDB
All DBs
Position
220209..221621
Genome browser
AA seq
470 aa
AA seq
DB search
MAETKSDTKSFDIIVIGGGPGGYVAAIRASQLGMKAAVIEREHLGGVCLNWGCIPTKALL
RAAELRHSIDEMKEFGITISGEVGIDLPTVVKRSRKVAGRLSMGVSHLLKKNKVTVFEAE
AKIGAKKGDIRTVTLADGTILQAKHVIIATGARARSLPDITPDGKTILTYKEAMVPESMP
ESLIIIGSGAIGSEFASFYHDMGVKVTLVEAVDRILPVEDPEISAIVQKAFVKRGMQVIT
GVMMASLKSNGKSVTATFDGTQEPVTADRAILAVGIIGNTENLGLDGTKVKVDRGHITTN
QWAETGEAGIYAIGDVTGPPWLAHKASHEGIICVEKIAGQKDVHAIGAGAVPGCTYCRPQ
VASVGMTEAAAKEAGHKIKVGRFPFIGNGKAIAMGDDQGLIKTIFDEKTGELLGAHMVGP
EVTELIQGYAIARTLEATEAELMQTIFPHPTLSEAMHESVLDAYGRAIHM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaaaatctgacactaagtcttttgatattatcgtgattggtggtggccct
ggtggctatgtcgcagcgatccgtgcatcacagctgggcatgaaagccgctgttattgag
cgtgaacatcttggtggtgtctgtctgaactggggctgtattccgaccaaggcgttattg
cgtgcggctgaattacgccattcgatcgatgagatgaaggaatttggcatcaccatttcg
ggcgaagtcggtatcgatttaccaacagtggtcaaacgctcgcgtaaggtggctggacga
ttgtcgatgggggtgtcgcacctgctcaagaagaacaaagttacggtgttcgaagctgaa
gccaagattggtgccaaaaagggcgatatacgcacggttacgctggcagatggcacaata
ctgcaggccaagcatgtgattatcgccaccggcgcccgggcgcggtcattgcccgacatc
acgccggatggcaaaaccatcctgacctataaagaggcgatggttccggagtccatgcca
gaatccttgatcattatcgggtcaggggcaatcggttccgaatttgcgtccttctatcat
gatatgggcgttaaggtgacattggttgaggcggtagatcgtattctgccggtcgaggat
cccgaaatttcggcaatcgtgcaaaaggcctttgtcaaacgcggcatgcaggtgataacc
ggtgtcatgatggcatcgctgaaaagcaacgggaaaagcgttaccgcgacctttgacggg
acgcaggaacccgtaacggctgatcgcgccattctggcggttggcattattggcaatacc
gaaaatctgggtctggatggcaccaaggtcaaagtcgatcgcggccatatcacaactaat
caatgggcagaaactggcgaggccggtatctatgcgattggcgatgtgacagggccgcca
tggctggcacataaggccagtcacgaagggatcatctgcgttgaaaaaatcgctggtcaa
aaggatgtccatgcgattggggcaggggcggtacctggatgtacctattgtcgcccgcaa
gttgcatcagtcggcatgaccgaagcggcggccaaagaagcggggcataagatcaaggtt
ggacgttttccgtttatcggcaatggcaaggcgattgcgatgggtgacgatcaggggctt
atcaaaacaatctttgacgaaaagaccggagaattgctgggcgcgcatatggtcggaccc
gaagtaaccgaactgattcagggctatgcaatcgcccgaacattggaagccaccgaggcg
gaattgatgcaaaccatcttcccgcatccaacactttctgaagcgatgcatgagtcagtc
cttgacgcctatggccgcgctatccacatgtag
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