Candidatus Puniceispirillum marinum: SAR116_0343
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Entry
SAR116_0343 CDS
T01207
Name
(GenBank) probable sarcosine oxidase (alpha subunit) oxidoreductase protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00260
Glycine, serine and threonine metabolism
apb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAR116_0343
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
SAR116_0343
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
SAR116_0343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
NAD_binding_8
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
HI0933_like
GIDA
DAO
FAD_binding_3
Fer2_BFD
NAD_binding_9
AlaDh_PNT_C
Thi4
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ADE38586
UniProt:
D5BQ88
LinkDB
All DBs
Position
complement(358973..361915)
Genome browser
AA seq
980 aa
AA seq
DB search
MTQQPFRHSTGGAINRSKSIKFEFNNNIYFGFEGDTLASALLANGVFLTARSFKYHRPRG
IMGAGVEEPSCLVELLGDNAAGNHAATTVQLCDGLRAKSVNCWPSPNFDLMGINQLFSRF
LPAGFYYKTFMWPNWHFFEPSIRRAAGLAAAPDDRIPDQHYETRYWYGDMLIVGGGACGL
LAALIASRSGARVMLVDDHPDLGGYLRTSQNTIDGKAAMDWVKDVIAELDANPDVTILRD
ATAWGYREDNQLLVTERNPSAEHVFQRGWKVRANQVVLATGAIERNLIFANNDRPGIMLA
SAVQRYVNEFAVTPGRRIVIFTNNSSAYALAHDLQTAKKDVVAIIDSRPLDNIGAEKDGL
DIPIHAMCQITAAHGAKHLNAISISDADGKITRLDCDLLAISGGWNPAVHLFSQSRGTLS
YDDDLASFVPDKAMQKVVSIGAAVGKMNIADAMAETVEAVTANLAQNGFACPALTMPKID
SVADYNLQPLWHVDGLKPGDKAFVDIQNDVTLDDIGLAMREGFDTVEHVKRYTTAGMGID
QGKTGNVNIIGHMAEVSNKSPGDIGTTTFRSPFTPVDFGAIAGQRNGKVVLPFRHTPITE
WNKKHGAVMYEAGARWQRPGYFPIKGGTMQDAINAEAEAVRFGVGVYDGSPLGKFDISGR
DAAAFIDLLYTNDFSNLEIGMGRYGIMLSEDGLILDDGVTFKLGDNHFMMSTSTGHADIV
FRHMEYVLQVECPDWQVWITPITSQWCNATICGPKARDVMAALDIDIDISAEAFPFMGIR
DAIVAGIPARICRVSFTGEVSFEISIWPRHAEAMWLRIMEAGEPFGIVPVGSETSHVLRV
EKGFLSLGHEADATADPYDLGMGWIMSRNKMHAIGRRSVDIRRSSGRPRRELVGLLPESG
GELVPEGAPITPNGARVASEGFVSACVWSVANKQVIALGLLTDGRARIGETVIIRDREKI
IKAIVTKPCFYDPKGQILRG
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaacctttccggcattcaacaggcggcgctatcaaccgctcaaaatcaatt
aaatttgaattcaacaataacatatattttgggtttgaaggggatacgctagcctcggca
ttgcttgcaaatggcgtgtttctgacagcccgatcatttaaatatcatcgccctcgtggc
atcatgggtgcaggtgttgaagaaccatcctgtcttgtcgagctacttggtgacaatgca
gctggaaatcacgcagcaaccacggtgcaattatgtgacggtctgcgtgccaaatcggtc
aattgctggccatcacccaattttgatctgatgggcattaaccagctcttctcacgtttc
ttaccagcagggttttattacaagaccttcatgtggccaaactggcatttttttgagcca
tcaattcgccgagcagcgggtcttgcggcggcacctgatgaccgcattccggatcagcat
tatgaaacacgctattggtatggcgacatgcttattgttggcggtggtgcctgcggattg
cttgcagcgctgatcgcaagtcgaagcggtgcacgcgtgatgcttgttgatgaccaccct
gacttaggtggctatttgcggacaagtcaaaacacgattgatggtaaagctgcgatggat
tgggtcaaggatgtcattgccgagcttgatgccaatccagacgtcaccattctcagagat
gctaccgcttggggctatcgagaggataatcagcttctggtaacagaacgcaatccttct
gcagaacacgttttccagcgaggctggaaagtccgggcaaatcaggttgtccttgccact
ggcgcgattgaaagaaatcttatattcgccaacaatgaccggccgggtataatgctggcg
tcagctgtgcagcgttatgtcaatgaatttgctgtaacgcctggtcgccgtatcgttatt
tttactaataatagtagcgcctatgcactggcacatgatcttcagactgctaaaaaggat
gtcgttgctattatcgatagccgcccattagataatattggcgcggaaaaggacgggctt
gatatacccatacatgcaatgtgtcagataactgctgcgcatggcgccaaacatctcaat
gctatcagcattagtgatgcagatggcaaaataacacgccttgattgtgatctattagcc
atatctggggggtggaatccggctgtgcatctattctcgcaatcgcgcggtaccctttcc
tatgatgatgatttggccagttttgttcctgacaaagcaatgcaaaaagtcgttagtatt
ggtgcggctgttggcaaaatgaatatagcagatgcaatggctgaaaccgtcgaagcggtt
accgccaaccttgcacaaaatgggtttgcctgccctgccctcaccatgcctaaaatagat
tcagtggctgattacaatctgcaaccgctttggcatgttgacggccttaagcctggcgat
aaggcttttgtcgatattcagaatgatgtcacacttgatgatattggccttgccatgcgc
gagggctttgacacagtcgagcatgtaaagcgctacaccacagcaggtatgggtattgat
cagggcaaaacaggtaacgtcaatatcattggacacatggctgaagtcagcaataaaagc
cccggagatattggaacaactaccttccgctctcctttcacaccggtagattttggtgcc
attgcaggacaacgaaatggcaaagttgttcttcccttccgtcataccccgattaccgaa
tggaataaaaaacacggcgctgtcatgtatgaggctggcgcccgatggcaacgcccaggc
tattttcccatcaagggcggaactatgcaggatgcaatcaacgccgaggcagaagccgtg
cgctttggtgttggggtttatgatggttcgccactcggcaaattcgatattagcggacgc
gatgcggcggcgtttattgacttactttataccaatgatttcagcaatctggaaattggc
atggggcgttatggtatcatgctgagcgaagacggcctgatccttgatgatggtgttaca
tttaaacttggtgataaccatttcatgatgtcgacctcaacaggccatgccgacattgtt
tttcgtcatatggaatatgtattgcaggttgaatgtcccgactggcaggtctggattacc
ccaataacgtcgcaatggtgtaatgccacaatctgtggtccaaaagcgcgggacgttatg
gccgcgctagacatcgatattgatataagtgctgaagcatttccgttcatgggtatccgc
gatgccattgtcgccggcatacctgcccgcatctgtcgcgtcagcttcaccggtgaagtc
agctttgagattagcatctggccacgtcatgctgaggctatgtggttacgcattatggaa
gctggagaacctttcggtattgtgccagttggctcggaaacgagtcatgtgttacgtgtt
gaaaagggctttctgtcgcttggacatgaagctgatgcaacagccgacccatatgatctt
ggtatgggatggattatgtcccggaataaaatgcacgcaattggccggcgttcggttgat
atacgcagatcatcaggaaggccgcgccgtgaacttgttggactattgcccgagtcgggt
ggagagcttgttcccgaaggggcaccaattacacccaacggcgcacgggttgccagcgag
gggtttgtgtcggcctgtgtatggagcgtcgccaacaaacaagttatcgctcttggtttg
ttgacagatggccgtgcccgcattggcgagacagtaatcatccgggatcgtgaaaaaata
attaaagcaattgttacaaaaccttgtttctatgatcctaaaggccaaatattgcgagga
tag
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