Candidatus Puniceispirillum marinum: SAR116_0529
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Entry
SAR116_0529 CDS
T01207
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAR116_0529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0529
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAR116_0529
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAR116_0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADE38772
UniProt:
D5BR75
LinkDB
All DBs
Position
complement(562606..563358)
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AA seq
250 aa
AA seq
DB search
MPEWVADAVIISAKPHGEGSAVVIVLTAENGRHAGLVRGGSSSKMRGILQPGNRVRVSWR
ARLIDQLGQMQIELINAIPALMLDDALRLAGIASACALLDGTLPEREAQHALYDGTNALF
DLMCLDDPDHRWIEGYIRWELGLLNAAGYQLDLTRCAASGAREKLAYVSPKSGCAIALDQ
AGEYVQRMLTLPVFLGGITNVASDHVSGLNLTGHFLEKRVFAAHNQDLPIQRRRLADMVL
SRYNQSAHIE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatgggttgctgatgccgtcattatttcggcaaagccacatggtgagggcagt
gccgtggtgattgtgctgaccgcagaaaatggtcgtcatgctggccttgttcgtggcggt
agctcatccaaaatgcgtggcattttacagcctggcaatcgcgtgcgcgtcagttggcgt
gctcggcttattgaccagcttggacagatgcaaattgaattgattaacgcgataccggct
ttgatgctagatgatgccttgcggcttgcgggcattgcgtcagcctgtgcattgcttgat
gggaccttgcctgaacgcgaagcccagcatgctttatatgatggaacaaatgccctgttt
gatctgatgtgtctcgatgatccggatcatcgctggatcgagggctatatccgttgggag
cttggcttgctgaatgctgcagggtaccagcttgatctgacacgctgtgctgccagtggt
gcccgggaaaagcttgcctatgtaagcccgaaatcgggatgtgcgatcgctttggatcag
gctggcgaatatgtccagcggatgctgacattaccggtatttctgggtggaattacgaat
gttgcatctgatcatgtttcaggcctgaatttaaccggtcatttccttgagaaacgtgtc
tttgcggcgcataatcaagatctaccaatacaacgaagacggctagccgatatggtctta
agccgctataaccaaagcgctcatatcgaatag
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