Candidatus Puniceispirillum marinum: SAR116_0531
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Entry
SAR116_0531 CDS
T01207
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAR116_0531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apb03019
]
SAR116_0531
03009 Ribosome biogenesis [BR:
apb03009
]
SAR116_0531
03036 Chromosome and associated proteins [BR:
apb03036
]
SAR116_0531
Enzymes [BR:
apb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SAR116_0531
Messenger RNA biogenesis [BR:
apb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAR116_0531
Ribosome biogenesis [BR:
apb03009
]
Eukaryotic type
90S particles
RNase
SAR116_0531
Prokaryotic type
rRNA processing factors
SAR116_0531
Chromosome and associated proteins [BR:
apb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SAR116_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADE38774
UniProt:
D5BR77
LinkDB
All DBs
Position
complement(564259..564951)
Genome browser
AA seq
230 aa
AA seq
DB search
MKSVDLKPLAERLAHKFNDQSVLVRALTHASFAGPTKSNERLEFLGDRVLGLVLADFFYG
QCPDEDEGKLSLRLHADARQSKLVEVGRELELARFISVQNGMALAENESVIADAVESLIA
AHYLDGGFEVARRFILAYWALDTAAPAGTDKDAKSRLQELVMKQGLALPHYRLISKSGPD
HAPEMIYEVSVEGYDSIVASASNRKLAEQQAAALMVAQITKKDLTKKEIT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagttgatctgaaaccactagccgaacggctggcacataaattcaacgatcaa
tcagtgcttgtccgtgctttgacacatgccagttttgcagggccgacaaaaagtaacgag
cggcttgaatttctgggggaccgggttcttggtcttgttctggctgattttttctatggt
caatgtccggatgaagatgaaggcaagttatctttgcgtttgcatgctgatgcccgtcag
tcaaagctagtcgaagttggccgtgaacttgaattggctcgttttatttcggttcagaac
ggcatggcgctagctgaaaatgaatcggtcattgctgatgcggttgagagtctgattgcg
gcgcattatcttgatggtggctttgaggtggcgcgtcgttttatccttgcatattgggcg
cttgatacggccgcgccagcaggtaccgacaaggatgccaagtcacggctgcaggaattg
gtcatgaaacaggggcttgccttgccacactatagattgatttctaaatctggacccgat
catgcgcctgaaatgatatatgaagtatctgttgaggggtatgattctatcgtggccagc
gcttcaaaccggaaactggcagaacagcaagccgctgcgcttatggtggcccaaataact
aaaaaagacctaaccaagaaagagataacatga
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