Candidatus Puniceispirillum marinum: SAR116_0537
Help
Entry
SAR116_0537 CDS
T01207
Name
(GenBank) RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAR116_0537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apb03021
]
SAR116_0537
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0537
Enzymes [BR:
apb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAR116_0537
Transcription machinery [BR:
apb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAR116_0537
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAR116_0537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADE38780
UniProt:
D5BR83
LinkDB
All DBs
Position
complement(569755..570165)
Genome browser
AA seq
136 aa
AA seq
DB search
MARVTVEDCIEKIPNRFELVLTAGQRARGILKGDVPTIDRDNDKNPVIALREIAEETVDL
DVLSEGLIKKLQRLSVREEQETHDDAAIAAEVDLSEMVGDYSDDEAQESGMQIGSSEELE
ETGFEDVDLTELQGED
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtcaccgttgaagattgtattgaaaaaatccctaaccgttttgagcttgtt
ttgacagctggtcaacgcgctcgtggcattttgaaaggcgacgttccgacgattgatcgg
gataatgacaaaaacccggtcattgcgctgcgtgaaattgctgaagaaaccgtcgatctt
gatgtgctttctgaggggttgatcaagaaattacagcgtctttctgttcgtgaagaacag
gaaactcacgacgatgctgctatcgctgctgaagttgacctatctgaaatggttggtgat
tacagtgatgatgaggctcaggaaagcggtatgcaaatcggtagcagcgaagagctggaa
gaaactggctttgaagatgttgaccttaccgaattacagggcgaggattaa
DBGET
integrated database retrieval system
